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SCNpilot_cont_300_bf_scaffold_180_curated_87

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(89451..90200)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=2 Tax=Pandoraea RepID=V5UCB9_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 81.8
  • Coverage: 247.0
  • Bit_score: 391
  • Evalue 6.40e-106
ABC transporter permease {ECO:0000313|EMBL:AHB04626.1}; TaxID=1416914 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Pandoraea.;" source="Pandoraea pnomenusa 3kgm.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.8
  • Coverage: 247.0
  • Bit_score: 391
  • Evalue 9.00e-106
ABC-type amino acid transport system permease component protein similarity KEGG
DB: KEGG
  • Identity: 78.5
  • Coverage: 247.0
  • Bit_score: 384
  • Evalue 3.20e-104

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Taxonomy

Pandoraea pnomenusa → Pandoraea → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 750
ATGAAGTATTCCCTCGACTTTGCTCCGTTGGCATCGTACTGGCCCGTTTTCATCAACGGCGCCTGGCTGACCCTCAAGATGACCGCGCTGGCCGTGGTCATCGGCGTGGCCGTCGGCACGCTGGTCGCGTTTGCCAAGCGCAGCAAGATCCGGCTGCTTTCGCGCGCCTGCACCATCTACATCGAGATCGTGCGCAACACGCCGTTCCTGGTGCAGATCTTCCTGCTGTACTTCGGCCTGGCCAGCTTCGGCGTGCGCATGCCGACCTTCGCGGCCGCCGTATTGGCGATGGTCATCAACATCGCGGCCTACGCCGCGGAGATCATCCGCGCCGGCCTGGAGTCGGTGCCGCGCGGGCAGATCGAGGCGGCCGAATGCCTGGGGCTTTCCAAGTGGCGCATCGGCTGGCACGTGATGCTGCAGCCGTCGATCGAGAAGGTCTACCCCGCCCTCACCAGCCAGTTCCTGCTGATGATGCAGGCCTCGGCCATGGCCTCGCAGATCTCGGCCGAGGAGCTCACCGCCATCGCCAACACGGTGCAGTCGGACACCTTCCGATCGCTGGAAACGTACATCGTGGTCGCGGCGCTGTACCTGGTGCTGTCGCTCTTCATCAAGCTCGTGACCTGGGCGCTGGGCGAGTACCTGTTCCGCCGCCGCCGCGTGGTGCGCCGCGCCGCAGCGCAGGCCGGCAAGATGCAACCCGCCGCCGCAACGGCCGCGGTAGCGGTGCACGGAGGCGCCGCATGA
PROTEIN sequence
Length: 250
MKYSLDFAPLASYWPVFINGAWLTLKMTALAVVIGVAVGTLVAFAKRSKIRLLSRACTIYIEIVRNTPFLVQIFLLYFGLASFGVRMPTFAAAVLAMVINIAAYAAEIIRAGLESVPRGQIEAAECLGLSKWRIGWHVMLQPSIEKVYPALTSQFLLMMQASAMASQISAEELTAIANTVQSDTFRSLETYIVVAALYLVLSLFIKLVTWALGEYLFRRRRVVRRAAAQAGKMQPAAATAAVAVHGGAA*