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SCNpilot_cont_300_bf_scaffold_180_curated_90

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 92346..93257

Top 3 Functional Annotations

Value Algorithm Source
kdgD; 5-dehydro-4-deoxyglucarate dehydratase KdgD (EC:4.2.1.41) similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 3.50e-169
Probable 5-dehydro-4-deoxyglucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; EC=4.2.1.41 {ECO:0000256|HAMAP-Rule:MF_00694};; 5-keto-4-deoxy-glucarate dehydratase {ECO:0000256|HAMAP-Rule:MF_00694}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 1.50e-168
Probable 5-dehydro-4-deoxyglucarate dehydratase n=1 Tax=Variovorax paradoxus B4 RepID=T1X9S6_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 303.0
  • Bit_score: 600
  • Evalue 1.10e-168

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 912
ATGAACCCCCAAGAACTCAAGACCATCATGGGCTCCGGCCTGCTCTCGTTCCCGCTGACCGACTTCGACAGCAACGGCGACTTCAACAAGAAGGGCTATGTCGAGCGCCTCGAATGGCTCGCACCCTACGGCGCCAGCGCGCTGTTCGCTGCCGGCGGCACGGGCGAGTTCTTCTCGCTGACCGGCGACGAGTACCCCGGCATCATCCAGACGGCCGTCGACACCTGCCGCGGCGTGGTGCCGATCATTGCCGGCGCCGGCGGCCCGACGCGCTTCGCCATCCAGTGCGCGCAAGCGGCGGAGAAGGCCGGCGCGCACGGCATCCTGCTGCTGCCGCACTACCTCACCGAAGCCGGCCAGGAAGGCCTGGCCGCGCACGTCGAAGCCGTGTGCAAGAGCGTGAAGTTCGGCGTGATCGTCTACAACCGCGCCACCAGCCGCCTCAAGCCCGACACGCTGGCCGGCCTGGCCGAGCGCAACCCCAACCTCGTCGGCTTCAAGGACGGCGTGGGCGACATCGAGGCGATGGTCGCGATCTACCAGAAGATGGGCGACCGCTTCGCCTACCTGGGCGGCCTGCCCACGGCGGAGGTCTATGCCGCGGCCTACAAGGCCATGGGCACGCCGGTGTATTCGTCGGCCGTCTTCAACTTCATCCCGAAGACGGCGATGGACTTCTATCACGCGGTCGCCAACGACGACCTGCCGACGCAGCACCGCCTGCTGAAGAACTTTTTCATGCCCTACTTGGAGCTGCGCAACCGCGTGCCCGGCTATGCCGTGAGCATCGTGAAGGCCGGCGCAAAGATCGTCGGCCACGGCGCAGGCCCGGTGCGCGCCCCGCTCACCGACCTGAAGCCCGCCGAGATGGAACAGCTCAAGGCGTTGATCGACGCGCTCGGCCCGCAGTAA
PROTEIN sequence
Length: 304
MNPQELKTIMGSGLLSFPLTDFDSNGDFNKKGYVERLEWLAPYGASALFAAGGTGEFFSLTGDEYPGIIQTAVDTCRGVVPIIAGAGGPTRFAIQCAQAAEKAGAHGILLLPHYLTEAGQEGLAAHVEAVCKSVKFGVIVYNRATSRLKPDTLAGLAERNPNLVGFKDGVGDIEAMVAIYQKMGDRFAYLGGLPTAEVYAAAYKAMGTPVYSSAVFNFIPKTAMDFYHAVANDDLPTQHRLLKNFFMPYLELRNRVPGYAVSIVKAGAKIVGHGAGPVRAPLTDLKPAEMEQLKALIDALGPQ*