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SCNpilot_cont_300_bf_scaffold_526_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 15297..16769

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036A4D04 similarity UNIREF
DB: UNIREF100
  • Identity: 78.6
  • Coverage: 491.0
  • Bit_score: 758
  • Evalue 5.10e-216
Variovorax paradoxus strain MEDvA23 contig_7, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ36252.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.8
  • Coverage: 491.0
  • Bit_score: 743
  • Evalue 1.80e-211
LuxR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 72.2
  • Coverage: 504.0
  • Bit_score: 708
  • Evalue 1.10e-201

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1473
ATGTCCGACGACACGACCATCACCGTTTTCGACGCCGTTCGCGCGCTGGCCTTCATCGGCGACCTGAGCATGGGCCAGCCGACCGATCATTCATTGCGCACGGCCTGGCTCGCCCAGCAGATCGCGGAGCGCGCCGGTTGCGGCGCGCCGCAGGTCGAGGTCGTGCGGCATGTTGCGCTGCTGCGATGGTCGGGCTGCACGGCCAATGCCCAGGCGTTCTCCGACTTCCTGGAGGACGATGTGCAGGGCCGGCGCCTGCTGCTCGCGTCGCGCGCGCCCCGCATGCGCCAGCCGAATCCCCATGCGCCACTGCCCGACGCGGTGCTGGCCATGGCCCGGATTCATTGCGAGATCGCCGGCGACCTTGCGCAAACCCTCGGGCTGGGCGCGGACACCGAAGCGGCCCTGCGCGCGGTGTTCGAGGCCTACGACGGCAATGGCGTCCCGGGTGTGCTGCAGGGCGGGCAGGTGCCGCTCGCGACCTGCATCGTGGCGCTGGCGAGCGACCTGGAGATTTTCGGCCGGCTGTACGGGGTGGAGGAGGCGCTCGCGCTGGCCCGCGGACGCGCGGACAGCCTGTATCCCGCCTTCCTGGTCGACGCGAGCGCTCCCTGCGCGGCCGCCTGGACGTCGGCCCTGGATGCGCCCGTCGCGCCATGGATGCAGGCCACAGATCAGCCTGCGTCGATGTCGCGGCCCATCGGGCTGGAACTCGTGGGCGACGTGATCGACCTCAAGCTGGCCTGGATGACGGGGTACTCGCGCCGGGTGGCCCGGCTGGCGCGCGACAGCGCCGTGCATTTGGGACTGGACGCCGCGGCCTGCCGCCGGACGTACAGGGCCGGGTTGATCCACGGCATCGGCCGCGCATCGGTTCCCAACACCGTCTGGAACACGCCCGAGCCGCTGCCTGCCGCCTCACTCGAGCGCGTGCGCCTCGTGCCGTACTGGACCTCGCGCGCCGCCGGGCAGATCGATGGCCTCGCGGCCGAGGCGGAGATCGCGTCCTTCGCCTTCGAGCGGCGCGACGGCTCCGGCCACTTCCGCGGCCGTTCCGGAGCGGCGATGCCGCTGGAAGGGCAGGTCGTCGCCGCCGCCGAGCAGTGGGTCTCGCTGAGCACACGCCGCCCGTGGCGCGCCGGGCTCGGCGAGGCGCAGGCGCTCGAGCGGATGAAGGCCGATGCCGACGCGGGCCGCTTCGATCCCGAGGTGGTCGCGGCGCTGTGCGCATCCATACTGCACGGCACGCCTTCGAAGGCCGCCGCGCCACCACAGGCCGAGCCAGCGCTCTCGCCGCGCGAACTCGAGGTCCTGCGCTGCATCGGACGGGGCGACAACACCAAGGAGGTGGCGCGCGCGCTGGGCATCAGCCCGAGCACGGTGCGCACGCATGTGGAGCGGCTGTTCCAGAAGCTGGAATGCACGACCCGCGCGGCTGCCACGCTGAAGGCTGTGACCCGGGGGTGGATCTAG
PROTEIN sequence
Length: 491
MSDDTTITVFDAVRALAFIGDLSMGQPTDHSLRTAWLAQQIAERAGCGAPQVEVVRHVALLRWSGCTANAQAFSDFLEDDVQGRRLLLASRAPRMRQPNPHAPLPDAVLAMARIHCEIAGDLAQTLGLGADTEAALRAVFEAYDGNGVPGVLQGGQVPLATCIVALASDLEIFGRLYGVEEALALARGRADSLYPAFLVDASAPCAAAWTSALDAPVAPWMQATDQPASMSRPIGLELVGDVIDLKLAWMTGYSRRVARLARDSAVHLGLDAAACRRTYRAGLIHGIGRASVPNTVWNTPEPLPAASLERVRLVPYWTSRAAGQIDGLAAEAEIASFAFERRDGSGHFRGRSGAAMPLEGQVVAAAEQWVSLSTRRPWRAGLGEAQALERMKADADAGRFDPEVVAALCASILHGTPSKAAAPPQAEPALSPRELEVLRCIGRGDNTKEVARALGISPSTVRTHVERLFQKLECTTRAAATLKAVTRGWI*