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SCNpilot_cont_300_bf_scaffold_526_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(16777..17649)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVA8_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 82.5
  • Coverage: 291.0
  • Bit_score: 469
  • Evalue 2.80e-129
Variovorax paradoxus strain MEDvA23 contig_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31381.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 282.0
  • Bit_score: 473
  • Evalue 2.10e-130
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 82.5
  • Coverage: 291.0
  • Bit_score: 469
  • Evalue 8.80e-130

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 873
ATGAGCAATCTCCTGAAACCACGGACCTCCAACGAACTCGACATCCGCGGCCTGGGCAAGCGCTACACCCATGCGCAGGCCAAGGGCGGCGAGTTGCAGGTGCTCGAGGGCATCGACCTGCACGTGCCTGAAGGCCGCTTCGTGAGCATCGTGGGCGCGAGCGGCTGCGGCAAGTCGACGCTGCTGCGGCTCATCCTCGGGCTGGACACCCAGTACGAAGGGCAGATCCTGCTGGGCGGCCAGCCCATCTCGGGCACGGGGCGCGAGCGCGGCATCGTGTTTCAGGACCACCGGCTCTTCCCCTGGCTCACGGTGGCGCAGAACATCGCGGTGGGTTTGCGCAATGCGCCGTACACCACGCGCGAGAAGGCCGAGCTGGTGGCCGAGCACGTGGCGCTGGTGGGCCTCGAAGGCTTCGAGCGCTCCTGGCCGCACCAGATTTCCGGCGGCATGGCGCAGCGCGTGGCCATTGCGCGCGGGCTGGTGAACCGGCCACGCGTGTTGCTGCTGGACGAGCCCTTCGGCGCGCTCGACGCGCTCACCCGCTCGCGGCTGCAGAACGAGCTGCAGCGCATCTGGCAGAAGGAACGCATCACCATGCTGCTGGTAACGCACGACGTGGAAGAGGCCGTGTTCCTGGGCGACCGCGTGGTGGTGATGCAGCCTTCGCCCGGGCGCATCCGCCGCACCGTGAACATCGACCTGCCGCATCCGCGCAATCGCAGCGACCCTGAATTCATCCGCCTGCGCGACGACGTGCTGGGCGACTTCATCGACAGCGGCGTCGAGCCGCCGGCTACGCCAGCCTCGCCCAGGCCGCACGGCGACCTGCCCGTGCCGGGCCTGGCGCCCGGCCTGCAGCTGGCCTGGTGA
PROTEIN sequence
Length: 291
MSNLLKPRTSNELDIRGLGKRYTHAQAKGGELQVLEGIDLHVPEGRFVSIVGASGCGKSTLLRLILGLDTQYEGQILLGGQPISGTGRERGIVFQDHRLFPWLTVAQNIAVGLRNAPYTTREKAELVAEHVALVGLEGFERSWPHQISGGMAQRVAIARGLVNRPRVLLLDEPFGALDALTRSRLQNELQRIWQKERITMLLVTHDVEEAVFLGDRVVVMQPSPGRIRRTVNIDLPHPRNRSDPEFIRLRDDVLGDFIDSGVEPPATPASPRPHGDLPVPGLAPGLQLAW*