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SCNpilot_cont_300_bf_scaffold_526_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17667..18482)

Top 3 Functional Annotations

Value Algorithm Source
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CVA9_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 270.0
  • Bit_score: 481
  • Evalue 6.70e-133
binding-protein-dependent transport systems inner membrane component similarity KEGG
DB: KEGG
  • Identity: 89.3
  • Coverage: 270.0
  • Bit_score: 481
  • Evalue 2.10e-133
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS18558.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.3
  • Coverage: 270.0
  • Bit_score: 481
  • Evalue 9.40e-133

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 816
ATGAGCGGCATCGCGAGGGATGCCGCCGAGCTGGCGGCCGTGCAACCGCTGCGCCCTGCCGAAGGCAGCCGCTGGCGCGGCCTCGTCTTGCCGGTGACGGCACTGGCGCTGTGGTGGCTGCTGTCATCGCTGGACATCGCCAACTCGGCGCTGCTGGTGTCGCCGGCCAAGGTGTTCGACACCGCGGCCGAGCAGGTGGCAAGCGGGCGGCTCTGGCGTGCGCTGAGCGCGAGCCTCGCGCGCGAAGCCACGGGCTTCACGATCGGCACCGCGTCGGGCCTGGTGCTGGGTGCGCTGCTGGGGTTGTCGCCGCTTTTCAACCGCATCGTGGGGCCCAGCTTCAACACCTTCAAGCAGATCTCGCTGTTCGCGTGGATTCCGCTCATCTCGGTGTGGTTCGGCCTGGGCGACGTGGCGAAGGTGGTGTTCCTGTCGCTGGCCGCGCTGGTGCCGGTGGTGGTGAACACCTGCGACGGCATCCGCACCGTGCCGCCCGGCCTGCTGGAAGTGGCGCGGGTCTACGGCTTCACGCGCTGGCAGACGGTCACGCAGGTGGTGCTGCCGGCCGCGTTGCCCGCCATCTTCACGGGCGTGTACCTCGCGCTCATCTATTCGTGGCTCGCGACCATCGGCGCCGAATACCTGCTGGTGTCCGGCAAGGGCATCGGCAACACACTGATCGAGGGCAGCGAGCATTTCCAGATGGACCTGGTGATCTTCGGCATGGTCGTGATCGGCACGGTCGGCTGGCTGATGAACGCCTCGGCCCGCGCGCTCGAACGCCGCCTGGCGCGCTGGACCGGCCGCGCAACCTGA
PROTEIN sequence
Length: 272
MSGIARDAAELAAVQPLRPAEGSRWRGLVLPVTALALWWLLSSLDIANSALLVSPAKVFDTAAEQVASGRLWRALSASLAREATGFTIGTASGLVLGALLGLSPLFNRIVGPSFNTFKQISLFAWIPLISVWFGLGDVAKVVFLSLAALVPVVVNTCDGIRTVPPGLLEVARVYGFTRWQTVTQVVLPAALPAIFTGVYLALIYSWLATIGAEYLLVSGKGIGNTLIEGSEHFQMDLVIFGMVVIGTVGWLMNASARALERRLARWTGRAT*