ggKbase home page

SCNpilot_cont_300_bf_scaffold_984_curated_10

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 10415..11242

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter ATP-binding protein n=1 Tax=Variovorax paradoxus RepID=UPI0003808F06 similarity UNIREF
DB: UNIREF100
  • Identity: 90.5
  • Coverage: 264.0
  • Bit_score: 470
  • Evalue 1.20e-129
Variovorax paradoxus strain MEDvA23 contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37194.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 264.0
  • Bit_score: 469
  • Evalue 3.70e-129
ABC transporter; K02049 NitT/TauT family transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 89.4
  • Coverage: 264.0
  • Bit_score: 467
  • Evalue 2.40e-129

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCATCAAGATCACCGCCCGCGGCGTGCGGATGGACTATGCGGCGCGCGGCGCCAGCGAGCGCGTGCGTGTGCTCGAGGGCTTCGACCTCGATGTGCGCGACGGCGAGTTCCTTTCGGTGCTCGGCCCCTCGGGCTGCGGCAAGTCGACCTTCCTGGGCATCCTGGCCGGACTCACGCAGCGCACCGGCGGCCACATCGCCATCGACGGGCGATCCGTTGCCGGCATCAACCGCAACCAGGGCGTGGTGTTCCAGGGCTACGCGCTCTTTCCGTGGCTCTCGGTGCTCGACAACATCGCGGTCGGACTGGAGATCCGCGGCCTGGGCAAGGCGGCGCGGCGGCGCACCGCTCAGGAGTACCTGGAGCTGGTGGGCCTGCACGGCTTCGGCGAGCGCTATCCGCATGAAATATCGGGCGGCATGAAGCAGCGCGTGGCTATTGCGCGCTCGCTCGCCTACGAGCCCGACGTGCTGCTGATGGACGAGCCCTTCGCCGCGCTGGACGCGCAGACACGCGAAGTGCTGCAGGGCGAACTGCTGCGCATCTGGGAACAGCACCGCAAGACCATCGTCTTCATCACGCACAGCCTGGAAGAGGCGGTGTATCTGTCGGACCGCGTGGCGGTGATGACGCAGCGGCCCGGCCGCATCAAGGACATCATCGACATTCCGCTCGCAAGGCCGCGCTCCGCGGAGCTGCGCCACACGGCGGAGTTCGCGGCGCTGCGGCATCGCGCATGGGAAGTTCTGAAAGACGAAGTGCATCTTGGGCAGCTCGGGCAGCCGCGCATCGCGGCCAAGCAGACGGCCGGAGCGCTGCCATGA
PROTEIN sequence
Length: 276
MSIKITARGVRMDYAARGASERVRVLEGFDLDVRDGEFLSVLGPSGCGKSTFLGILAGLTQRTGGHIAIDGRSVAGINRNQGVVFQGYALFPWLSVLDNIAVGLEIRGLGKAARRRTAQEYLELVGLHGFGERYPHEISGGMKQRVAIARSLAYEPDVLLMDEPFAALDAQTREVLQGELLRIWEQHRKTIVFITHSLEEAVYLSDRVAVMTQRPGRIKDIIDIPLARPRSAELRHTAEFAALRHRAWEVLKDEVHLGQLGQPRIAAKQTAGALP*