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SCNpilot_cont_300_bf_scaffold_984_curated_11

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 11239..12066

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00036E5E57 similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 275.0
  • Bit_score: 486
  • Evalue 1.60e-134
binding-protein-dependent transport systems inner membrane component; K02050 NitT/TauT family transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 88.0
  • Coverage: 275.0
  • Bit_score: 470
  • Evalue 3.80e-130
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:ACS18548.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 88.0
  • Coverage: 275.0
  • Bit_score: 470
  • Evalue 1.70e-129

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGAGCGCGGTACTCGACACACCCGTGGTGCGCCCGCCCACGCGCCTGCTGCGCATCGTGCGCGGCGCGGGCCGTTGGGCCGAGCGCGGCATCGGCATCGTGCTGTTCCTGCTGCTGTGGGAAGCGCTGCCGCGACTGGGCATCGTGAGCGACGCCTACCTGAGCCCGCCCTCCGCGGTGCTCGCCGCCATCGGGCAACTGCTCGACAACGGGCTGCTGTGGAAACACGTGGCGGCGAGCCTGCAGCGCTCGCTGTGGGGGTTGGTGCTGGCCAGCGCGGCGGGCGTGGTGCTGGGGCTGCTGATCGGCGGCTTCAGGCGCCTGGCGGCCATCGTCGATCCGCTACTGCAGTTGTTTCGCCAGACCTCGGCCTTCGCGCTCTTTCCGGTGTTCATCCTGTTCCTTGGCATCGGCGAGCTGTCGAAGGTGGCGATCATTTTCTGGGCCTCGTTCTGGCCGGTGCTGCTGAGCACGGTGAGCGGCGTGAAGCAGGTCGACCGGCTGCTGGTCAACTCGGCCCTGTCGATGGGCGCCTCGCGCCGCTTCATCTTCTTCAAGGTGGTGCTGCCCGCCTCGCTGCCGTCGATCTTCACGGGCGTGCGGTTGGCCGGCGCCTACAGCATCACGGCGCTGGTGGCGGCAGAGATGATCGGCGCGCACTCGGGGCTGGGTTTTCTCACGCTGAACTCGCAGGAGACGTTCCAGATCCCGACCATGTACGCAGGCATCCTGATGCTGGCGGTGCTGGGCCTGCTGCTGAACTACCTGCTCGCGCTGCTGGAGCGGCACCTGCTGCGCTGGCGCCGGGGGTTGAGCCTCGATGAGTGA
PROTEIN sequence
Length: 276
MSAVLDTPVVRPPTRLLRIVRGAGRWAERGIGIVLFLLLWEALPRLGIVSDAYLSPPSAVLAAIGQLLDNGLLWKHVAASLQRSLWGLVLASAAGVVLGLLIGGFRRLAAIVDPLLQLFRQTSAFALFPVFILFLGIGELSKVAIIFWASFWPVLLSTVSGVKQVDRLLVNSALSMGASRRFIFFKVVLPASLPSIFTGVRLAGAYSITALVAAEMIGAHSGLGFLTLNSQETFQIPTMYAGILMLAVLGLLLNYLLALLERHLLRWRRGLSLDE*