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SCNpilot_cont_300_bf_scaffold_984_curated_12

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 12059..13021

Top 3 Functional Annotations

Value Algorithm Source
Extracellular solute-binding protein family 3 n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CV98_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 66.6
  • Coverage: 314.0
  • Bit_score: 393
  • Evalue 2.20e-106
Variovorax paradoxus strain MEDvA23 contig_3, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ37192.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 301.0
  • Bit_score: 394
  • Evalue 1.40e-106
family 3 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 66.6
  • Coverage: 314.0
  • Bit_score: 393
  • Evalue 6.80e-107

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 963
ATGAGTGAAACCGCATCCGACCCGCTCGTCGCCCATCGGAGAGCAGCCCGCAGCGCGGCCGGCACGCTGATGGTCGTGGCCATGGCGCTCGCTGTACTCGGCGGCATCGGCGGCTCGTGGGGCTTCGCGGGCACCGGCGACGCGGGCCTTCCCGCCTCGCTCTCCTGGCTGCGGCTGCTCGACACCGCGCCGCCGCTGCTCAACCTGCCGAAGGGCCCCGTGCTCGAACGCGCGGCGGCGCGCGGCGAGCTGCGCGTGGGCGTGCGCCATTACCCGCGGCCCGCACCGCCCGAAGCGCCGACGCCGCCGGAACCCGATGCCTTCGACGCGACGCTGGCGCGGCAGCTCGCCGACTCGTTGGGCCTGAAGCTGCAGCTGATCGGGCTCGCGCCCGAGGAACGGGAGTCGGCCTTGCGCAACGGCCGTATCGACCTGCTGCTGGCCGGCGTGTCCGACGATGCGGCACCCCAGCCGGGCATTGCCGCGGCACCGGGCAGCTACGACACCGGACACGGCGAGGTGGTGGTGTTGCGCCGCGGGCGCCTGCAGGACGAGGCAAGCCTGCGCGGCGCGTCGGTGTGCGTGGGAGAGGGTTCGGGCTATGCCGGCGTGGTGGCGCAACGCTATGGCGCACAGCCGCGCAGCTACCCATCCTCCGTGCATGCGGCTTCCGCCTTCATGGCAGGCGAATGCGCAGCCCTGGCCGAAGACGGCGAGGTGTTGAAGCGACTGATGGCCAATGAAGAGTGGCGTTTCTACAAGCCGTTGGCGCAGGGCCTGGCCTTGCACGGCGACGCTTCGGTACGGCTGACCGAGGGCGATGCGGCGTCGCGCGACTACATCGCCGCAGCGCTGCGCCGTTGGCAAGCCGACGGCACGCTCGCGAAGGCGCGCAGCGCGCGGGCGGGCAACCTGCAGTTCGAGATCACGCTGTTGAAGGACGGGCTGGTCTGTCACTCCTGA
PROTEIN sequence
Length: 321
MSETASDPLVAHRRAARSAAGTLMVVAMALAVLGGIGGSWGFAGTGDAGLPASLSWLRLLDTAPPLLNLPKGPVLERAAARGELRVGVRHYPRPAPPEAPTPPEPDAFDATLARQLADSLGLKLQLIGLAPEERESALRNGRIDLLLAGVSDDAAPQPGIAAAPGSYDTGHGEVVVLRRGRLQDEASLRGASVCVGEGSGYAGVVAQRYGAQPRSYPSSVHAASAFMAGECAALAEDGEVLKRLMANEEWRFYKPLAQGLALHGDASVRLTEGDAASRDYIAAALRRWQADGTLAKARSARAGNLQFEITLLKDGLVCHS*