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SCNpilot_cont_300_bf_scaffold_984_curated_18

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17651..18133)

Top 3 Functional Annotations

Value Algorithm Source
elongation factor GreAB n=1 Tax=Acidovorax radicis RepID=UPI0002375BDD similarity UNIREF
DB: UNIREF100
  • Identity: 92.5
  • Coverage: 159.0
  • Bit_score: 290
  • Evalue 1.30e-75
transcription elongation factor grea/greb domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 88.7
  • Coverage: 159.0
  • Bit_score: 278
  • Evalue 1.20e-72
Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_99_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.2
  • Coverage: 159.0
  • Bit_score: 283
  • Evalue 2.20e-73

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Taxonomy

RLO_Burkholderiales_64_99 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 483
ATGGATAAATTCTTGCTGCAACAGCAGGTACTGGAACGGCTCGCCGAAGACCTGCTGCAAGCCGAGCAGGCAGTGCGGGCAGCCCATGAAACGGCGACTCACGAAGAAAACATCGCCGAAAACAAATACGACACATTGGGGCTCGAAGCCGCCTACCTGGCCACCGGCCAAGCTCGGCGCGCCGAAGCCATACGCCAGACGATGGCCAATTGGCGCCGATTCTGCCCGCGTCCCTACGACGCCATCAAAGGCATACAGCTCGGCTCGCTGGTCTACCTGGTCGATTCCGACGACAAGCAGCAACAGCTCTTTCTCGGCCCGGAGGGGGGCAGCATGAAGTTGGTCAGCGGCTCTCAGCTTGTTCAGGTCATCAGCAGCGAAGCCCCTTTGGGTAGGGCAATGCTGGGCAAATGCGAGGGTGATGAGGTGTCGATACAGATCGCTCCAATCCGGCAGCAGTTTGAAGTGCTTCGGGTTCTTTAA
PROTEIN sequence
Length: 161
MDKFLLQQQVLERLAEDLLQAEQAVRAAHETATHEENIAENKYDTLGLEAAYLATGQARRAEAIRQTMANWRRFCPRPYDAIKGIQLGSLVYLVDSDDKQQQLFLGPEGGSMKLVSGSQLVQVISSEAPLGRAMLGKCEGDEVSIQIAPIRQQFEVLRVL*