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SCNpilot_cont_300_bf_scaffold_984_curated_19

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 18454..18957

Top 3 Functional Annotations

Value Algorithm Source
DTW domain containing protein n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V1X4_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 91.6
  • Coverage: 167.0
  • Bit_score: 310
  • Evalue 1.30e-81
Variovorax paradoxus strain MEDvA23 contig_12, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ34672.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.2
  • Coverage: 167.0
  • Bit_score: 319
  • Evalue 3.80e-84
dtw domain containing protein similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 167.0
  • Bit_score: 310
  • Evalue 4.00e-82

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 504
GTGCTGCAGCACCCGCTGGAGGTACACCAAGCCAAAGGCAGTGCCCGCCTGCTGCACCTCAGCTTGGCGCACTGCCGCTTGGTGGTGGGTGAGGCATTTGCCGTGCCAGTCTGGCCGGTGGACGGCAAGCACACGCTGCTGCTGTACCCGGACAGTCTGCAAGATACCGCCCCGGACCTGCGGGTCTCACCCCAGCTACCCCCCGAGTGGCCGCAAGCCCAGTCGCGCCTGCGTCTGGTCGTGCTGGACGGCACCTGGCGCAAAAGCCGAAAGATGCTCCACCAAAGCCCGCCACTGCAACAGTTGCCCCGCTTGGCCCTGCGCAACCTGCCGCCTTCGCACTACCGTATCCGCAAAGCCCATGGGCCCGATCAACTGTCGACGCTGGAGGCGACCTGCTACGCCTTAGGCCAACTGGAAGGCGGCGCGGAGCGGTTCCAGCCCTTGTTGAATGCCTTCGACGGGTTTGTTGAGTACTTGGAGCAGGCTGGCGGGCAGCGGTAG
PROTEIN sequence
Length: 168
VLQHPLEVHQAKGSARLLHLSLAHCRLVVGEAFAVPVWPVDGKHTLLLYPDSLQDTAPDLRVSPQLPPEWPQAQSRLRLVVLDGTWRKSRKMLHQSPPLQQLPRLALRNLPPSHYRIRKAHGPDQLSTLEATCYALGQLEGGAERFQPLLNAFDGFVEYLEQAGGQR*