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SCNpilot_cont_300_bf_scaffold_403_curated_29

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 30656..32767

Top 3 Functional Annotations

Value Algorithm Source
Flagellar biosynthesis protein FlhA n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN5_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 87.8
  • Coverage: 704.0
  • Bit_score: 1179
  • Evalue 0.0
Flagellar biosynthesis protein FlhA {ECO:0000313|EMBL:ACS18891.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.8
  • Coverage: 704.0
  • Bit_score: 1179
  • Evalue 0.0
flagellar biosynthesis protein FlhA; K02400 flagellar biosynthesis protein FlhA similarity KEGG
DB: KEGG
  • Identity: 87.8
  • Coverage: 704.0
  • Bit_score: 1179
  • Evalue 0.0

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2112
ATGAAGGCGCTTGCGAAGGTCTTCGAAAAACACAGCGATATCGCGCTGGTGCTGCTTGTTCTCGGCGTGCTGGTAGTGCTCTTTGCACCCATTCCCAGTGGGTTGCTGGACTTCCTGATCCTGACGAATTTCAGCTTCGCATTCCTCGTGCTACTGCTGACCTTCTACATGGCAAGGCCGGTGGAGTTCTCGACATTCCCTTCGCTGTTGCTCATTGCCACTTTGTTCCGCTTATCGTTGAACGTCGCGGCCACGCGACTCATCCTGTCCGATGGCGACGCAGGGCGTGTCATCGGCGCCATCGGCGCTTTCGTCGTCGGCGGAAACTACGTCATCGGGCTGATCGTCTTCCTGATCCTGATCGTGGTGCAGTACGTGGTGGTCACCAGCGGCGCCCAGCGGGTGTCAGAGGTGGCGGCGCGTTTCACGCTCGACAGCATGCCCGGCCAGCAGATGAGCATCGATGCGGACCTCAACATGGGTTTCATCGACCAGGCCGAGGCACAGCGGCGCCGCAAGAACATCGAAAAGGAAGCGGGCTTCTACGGCGCGATGGACGGTGCGAGCAAGTTCGTCAAGGGCGATGCCATCGCGGGCATCATCATCCTGCTGATCAATATCATCGGCGGGCTGGTGATCGGTGTGATGCAGCACGGCCTGCCGTGGGGGCAAGCGCTGCAGACCTACACACTGCTCACGATCGGCGATGGCATCGTGACGCAGGTGCCCGCGCTGGTGATCGCGGTGGGTACCGGCATCATCGTCACGCGTTCCTCTTCCGACACCAACCTGAGTCGCGAAGCCCTGCGCCAGGTGAGTTCTTTCCCGAAGACGCTGCTGATGGTCGCGTTGGCGTTGGGAGGCTTGCTGGTGCTGCCTGGAATTCCCGCGATCCCCACGTTGGTGTTGACTGCCGGGTTCTTGCTGGCGGCCACGTTGCTCTATCGTGCGGCCAAGGTCAAAAGCGATAACGCGGCGCAGGGCATGGGCGACCCCATCGACCCCGAAAATCTTGCTGCCGCCGACGGCACGGCTGCAGCAGCCGCCAGCGACGATCCCTACACGTTGCTTCAAGTCGAACCCGTCGAGGTGCATCTAGGTGGCAACTGGGGGCCGGTGATCAACCAGCCCGGCAGCGTGTTCATGGAGCGTATCGCGAGCTTTCGCAAGCAGCATGCGAACGAGTTCGGTCTTGTATTGCCACGCGTGCGATTCAAGGACTCGTCACGTCTGTCGGCTGATCGCTACGAGATCCATCTGGACGGCGTGCTGGTCGGCAAGGGCGAGGCGCGAGCCGACCGCTTGCTAGCGATCCATCCTTCAGGAGATACCAAATCCATCCCCGGCGAGCCAACACGCGACCCTACCTACGGGTTGCCCGCACTGTGGATCGAGGAACGTCAGCGCGAGGCGGCGGCACAAGCGAAATTCACGCTGGTGGATGCACCCACTGTCTTCATGACTCATCTGACGGAAATGCTGCGTCGCGAATCGGCGACGTTGTTGACCCGTTCGGAAGTCGATAGGCTGCTGTCGCGCGTGCGCAAGAGCCAGCCGGGCCTTGTGGAAGAGCTGATCCCGACTGTGCTCTCGGCCAGCGACGTGCAGAAAGTCCTGCAGAACCTCTTGCGGGAGAAGGTCTCGATTCGGCACGTCGAGGCGATTCTCGAGACGCTGGCCGATGCAGGGCGCGCGACGCGTGACACAGCGCAATTGACGGAAATTGTGCGTCAGCGGCTGGGCCATGCCATCTGTCAGGGCCTGATCGGAGAGGCGAGCGCCTTGCAGGTGCTTACCCTCGATCCCGCGATCGAGAGCCAGTTTCTGCAGAGCATGCAGATCGCGGTAGGTGAAGCAGGAGCGACGACCGCGGCGGGCACGCAGCCCTTCGTGATCGATCCGCGCCTGTCGGAACAGCTGATCAAGCGTCTCGTCCAGCAGGCCGAGCGGATGATGAAGAGCAACCTGCTGCCTGTTCTGCTCTGTGCGCCCGAACTCCGGCGCCATGTTCGAGGCCTGTCAGAGCGTGTCATGCCGCACCTTCGCGTCCTGTCCATGGCCGAGGTGCCCCACACCATCGAGCTGAAATCCTTCGGCATCGTGCAACTTTGA
PROTEIN sequence
Length: 704
MKALAKVFEKHSDIALVLLVLGVLVVLFAPIPSGLLDFLILTNFSFAFLVLLLTFYMARPVEFSTFPSLLLIATLFRLSLNVAATRLILSDGDAGRVIGAIGAFVVGGNYVIGLIVFLILIVVQYVVVTSGAQRVSEVAARFTLDSMPGQQMSIDADLNMGFIDQAEAQRRRKNIEKEAGFYGAMDGASKFVKGDAIAGIIILLINIIGGLVIGVMQHGLPWGQALQTYTLLTIGDGIVTQVPALVIAVGTGIIVTRSSSDTNLSREALRQVSSFPKTLLMVALALGGLLVLPGIPAIPTLVLTAGFLLAATLLYRAAKVKSDNAAQGMGDPIDPENLAAADGTAAAAASDDPYTLLQVEPVEVHLGGNWGPVINQPGSVFMERIASFRKQHANEFGLVLPRVRFKDSSRLSADRYEIHLDGVLVGKGEARADRLLAIHPSGDTKSIPGEPTRDPTYGLPALWIEERQREAAAQAKFTLVDAPTVFMTHLTEMLRRESATLLTRSEVDRLLSRVRKSQPGLVEELIPTVLSASDVQKVLQNLLREKVSIRHVEAILETLADAGRATRDTAQLTEIVRQRLGHAICQGLIGEASALQVLTLDPAIESQFLQSMQIAVGEAGATTAAGTQPFVIDPRLSEQLIKRLVQQAERMMKSNLLPVLLCAPELRRHVRGLSERVMPHLRVLSMAEVPHTIELKSFGIVQL*