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SCNpilot_cont_300_bf_scaffold_403_curated_30

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 32787..33572

Top 3 Functional Annotations

Value Algorithm Source
Putative uncharacterized protein n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5CXN6_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 76.6
  • Coverage: 261.0
  • Bit_score: 384
  • Evalue 6.30e-104
hypothetical protein; K02392 flagellar basal-body rod protein FlgG similarity KEGG
DB: KEGG
  • Identity: 76.6
  • Coverage: 261.0
  • Bit_score: 384
  • Evalue 2.00e-104
Uncharacterized protein {ECO:0000313|EMBL:ACS18892.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 76.6
  • Coverage: 261.0
  • Bit_score: 384
  • Evalue 8.80e-104

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 786
ATGAGCGACGTACTGGCAATCAGCCTTCTCAGCATGCAGCAGGACATGGGGCGCCTGGAGCGCATCAGCCTGAACATGGCGAACGCCACCACGCCGGGCTACAAGCGAGAAGTAGTGACATCGCTGCCGATGGGGGCGAGCGGCTTCGTCGACGCCATGCGCGGGGCTGATGCGTCCTGGTCCGGTACCGCGCAGCCTGCATCGACTTCTGTAGCTGCCGCGCCGTTCATGGTCCAGACTGACCTGCGCCCGAGCACGCTCAAGACCACCGGCCAGAGTCTGGATGTGGCGCTGGCAAATTCTGGTTTCTTCGAGGTGTCCACCCGGGCGGGCCTCGCCTACACCCGACAGGGCAACTGGCAGCTGGACCCGCGAGGTCGCCTTGTCACTGCGAAGGGACACCCGGTCATGGGCGTGGGGGGCGAGATCGTGCTCACGCGACCGAATCCCGTCATCGACGCCGTGGGCCAGGTGTTCGAGTCACGACCTGGCGGTGGCGCTGAAGCGACGCCCGTGGCGCAGTTGAAGGTAGTGGGCTTCGATAACGGCACGGATCTGCAGCGCATGGGCGAGGGCTTGGTGACGACGCAGCAGGTGCCGAATCAGCTTGCAGATGCGGATATACAGGTTCGCCAGGGATTCCTCGAGAACTCCAACGTCAACTCGATGCAAGAGATGGCACAGCTGATTCAGTCGATGCGGCATTTCGAGTCGATGCAGAAAGTGGCCCTGGGCTACGACGAGATGATCGGCGGCGCCGTGCGCAAGCTGGGCGAGATGTCCTGA
PROTEIN sequence
Length: 262
MSDVLAISLLSMQQDMGRLERISLNMANATTPGYKREVVTSLPMGASGFVDAMRGADASWSGTAQPASTSVAAAPFMVQTDLRPSTLKTTGQSLDVALANSGFFEVSTRAGLAYTRQGNWQLDPRGRLVTAKGHPVMGVGGEIVLTRPNPVIDAVGQVFESRPGGGAEATPVAQLKVVGFDNGTDLQRMGEGLVTTQQVPNQLADADIQVRQGFLENSNVNSMQEMAQLIQSMRHFESMQKVALGYDEMIGGAVRKLGEMS*