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SCNpilot_cont_300_bf_scaffold_174_curated_165

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 196357..196869

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein n=1 Tax=Variovorax paradoxus RepID=UPI00036690F3 similarity UNIREF
DB: UNIREF100
  • Identity: 87.6
  • Coverage: 170.0
  • Bit_score: 296
  • Evalue 1.50e-77
Type VI secretion lipoprotein, VC_A0113 family {ECO:0000313|EMBL:EJL77504.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.6
  • Coverage: 170.0
  • Bit_score: 296
  • Evalue 2.10e-77
type VI secretion lipoprotein; K11906 type VI secretion system protein VasD similarity KEGG
DB: KEGG
  • Identity: 79.2
  • Coverage: 173.0
  • Bit_score: 269
  • Evalue 7.90e-70

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 513
ATGCGCACGCTGGGTACACACCATTCGTCCTATGAGGACTTCATCGGCGAGATGCCGCGGCGACGCATCGCCGTTCTTGGCCTTGCTGCAGCGGGTCTTTCGCTCATTGGCTGCGCGAGCAAGCCGGTGGTGACGACCGTCGCGGTCTCGCTCACGGCGGGCCCCGACGCCAACCCCGACGCGCGCGGACGCGCATCGCCGCTCACGGTGCGCGTGTATGCGCTGAAGTCGCCCGGCCCCTTCGAAGGCGCCGACTTCTTCTCGCTTTTCGAGAAAGACCAGGCCACGCTCGGCGCCGAACTCGTGCAGCGCGAAGAAGTGCTGCTGCGGCCCGGCGAAAGCAGGAAGCTCGACTTCAACCTGCCGCCCGACGCCAAGGCCATCGGCGTGATGGCGGCGTTTCGCGACCTCGATCGCGCGCGCTGGCGCGAGGTGCGCCCGGTCACGACCGGCAAGGCGCAATCGCTCGATGTGCTGCTGGGCGCGCGGCAGATGCGCATCGACGCGAAGTAG
PROTEIN sequence
Length: 171
MRTLGTHHSSYEDFIGEMPRRRIAVLGLAAAGLSLIGCASKPVVTTVAVSLTAGPDANPDARGRASPLTVRVYALKSPGPFEGADFFSLFEKDQATLGAELVQREEVLLRPGESRKLDFNLPPDAKAIGVMAAFRDLDRARWREVRPVTTGKAQSLDVLLGARQMRIDAK*