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SCNpilot_cont_300_bf_scaffold_174_curated_164

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(195245..196285)

Top 3 Functional Annotations

Value Algorithm Source
type VI secretion protein ImpA n=1 Tax=Variovorax paradoxus RepID=UPI000372184E similarity UNIREF
DB: UNIREF100
  • Identity: 83.4
  • Coverage: 349.0
  • Bit_score: 556
  • Evalue 1.60e-155
type VI secretion-associated protein, ImpA family similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 346.0
  • Bit_score: 524
  • Evalue 2.80e-146
Type VI secretion-associated protein, ImpA family {ECO:0000313|EMBL:AGU47757.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus B4.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.7
  • Coverage: 346.0
  • Bit_score: 524
  • Evalue 1.20e-145

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1041
ATGCTGAACAACGAACTTGCCTCCGCACTGCTCACGCCCATCGGCGAAGCATCGCCATGCGGCGACGACCTGGAGTACGACGCGGACTTCACCGCGCTCGTCGCGGCCGCGCAAGGCAAGCCCGAGCAGCAGTTCGGCGACACGGTGATCCCCGCCGTCGAGCCCGAGTGGCGCGAAGTAGCCGAGCAGTCCGACGCCATTCTTCGCCGCAGCAAGGACGTGCGCGCCGCGGTGCTGCTGCTGCGCGCGGCCACGCGCATGCAGGGCGTCACCGGCTTCGCGGCCGGGCTGCGCCTGCTGGGCGACCTGCTCGACGGTTTCTGGGACGGCATACATCCAAAGCTCGATGCGGACGACGACAACGATCCGACGATGCGCCTGAACGCGCTCGCGCCATTGACCGACGAAGGCATGGGCCTGCGCGACCTGTACGACGCGCAGGTCGGCATGGCGCGCGGCATCGGGCCGATCCGCGTGCGCGACATCGCCATCGCGCACAACGCGCTCACCGCCGTCGGCGGCGAGGCCACGTATTCCATGGCGCAGGTGCAGGGCGGCCTCGAAGCCATCCAGGCCGAGCGGCCCGAGGCCATCCAGGCCGCCGTCGAAGTGCCCGCGCTGATCGAGCGCCTGCACAGGCTCATCGTCGATCGCACCGGGCGAGCCGACGCGGTCGACTTCGACGCGCTGCGCGGCATCGGCCGCGTGCTGCACAAGGCCTGCGCCGCCGCCAGCGGCGCGCCGGCCGATGCAGCGGAAGCCGCAAGCGACGATGCCGACGCAGGCACGCAGGATGCAAGCGCATCGGGCACGCGCCCCGCAGCCGCGCGCGGCGAGATCCAGAACCGCCAGGACGCGGTGCAGATGCTCGACCGCGTGATCCGCTACCTCGAGCAGGCCGAGCCCGGCAACCCCGCGCCGCTCCTGATCGAGCGTGCCAAGAAGCTCATCGGCGTGAGCTTCCTCGAGATCATGGCCAACCTCGCGCCCAACGCGATGGACACCATCGAGACGGTCACGGGCCGACGCCCTTCCGAATAG
PROTEIN sequence
Length: 347
MLNNELASALLTPIGEASPCGDDLEYDADFTALVAAAQGKPEQQFGDTVIPAVEPEWREVAEQSDAILRRSKDVRAAVLLLRAATRMQGVTGFAAGLRLLGDLLDGFWDGIHPKLDADDDNDPTMRLNALAPLTDEGMGLRDLYDAQVGMARGIGPIRVRDIAIAHNALTAVGGEATYSMAQVQGGLEAIQAERPEAIQAAVEVPALIERLHRLIVDRTGRADAVDFDALRGIGRVLHKACAAASGAPADAAEAASDDADAGTQDASASGTRPAAARGEIQNRQDAVQMLDRVIRYLEQAEPGNPAPLLIERAKKLIGVSFLEIMANLAPNAMDTIETVTGRRPSE*