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SCNpilot_cont_300_bf_scaffold_174_curated_163

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(194671..195186)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00037FF003 similarity UNIREF
DB: UNIREF100
  • Identity: 97.7
  • Coverage: 171.0
  • Bit_score: 325
  • Evalue 3.00e-86
Type VI secretion protein, VC_A0107 family {ECO:0000313|EMBL:EJL77502.1}; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.7
  • Coverage: 171.0
  • Bit_score: 323
  • Evalue 1.60e-85
type VI secretion protein; K11901 type VI secretion system protein ImpB similarity KEGG
DB: KEGG
  • Identity: 94.2
  • Coverage: 171.0
  • Bit_score: 316
  • Evalue 7.40e-84

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 516
ATGGCCAAGAGCAGTCAGAAATTCATCGCCCGCAACCGGGCGCCCCGGGTCCAGATCGAGTACGACGTAGAGCTGTACGGCGCCGAGAAGAAGGTGCAGCTGCCCTTCGTGATGGGCGTGCTGGCCGACCTGTCGGGCAAGCCCGCCGACCCGCTCGCGCCGGTGGCGGACCGCAAGTTCCTGGAGATCGACGTCGACAACTTCGACTCGCGCATGAAGGCCATGAAGCCTCGCGCCGCGTTCGCGGTGGAGAACTCGCTCACCGGCGAAGGCGACCTGAAGGTCGAGCTCACCTTCGAGAACATGGAAGATTTCTCGCCCGCCGCCGTGGCCCGCAAGGTGGGCGCGCTGAACAAGCTGCTCGAGGCCCGCACGCAGCTGTCGAACCTCGTGACCTACATGGACGGCAAGGGCGGCGCCGAAGACCTGCTGGCCAAGGTGCTCGAAGACCCGGCCCTGCTGCAGACGCTGGCCGCGAGCAAGAAGCCCGAAGACGGCAGCACGCCCGCCGCCTGA
PROTEIN sequence
Length: 172
MAKSSQKFIARNRAPRVQIEYDVELYGAEKKVQLPFVMGVLADLSGKPADPLAPVADRKFLEIDVDNFDSRMKAMKPRAAFAVENSLTGEGDLKVELTFENMEDFSPAAVARKVGALNKLLEARTQLSNLVTYMDGKGGAEDLLAKVLEDPALLQTLAASKKPEDGSTPAA*