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SCNpilot_cont_300_bf_scaffold_174_curated_162

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(193136..194629)

Top 3 Functional Annotations

Value Algorithm Source
Type VI secretion protein, EvpB/VC_A0108 family n=1 Tax=Variovorax paradoxus B4 RepID=T1X6G9_VARPD similarity UNIREF
DB: UNIREF100
  • Identity: 97.4
  • Coverage: 497.0
  • Bit_score: 985
  • Evalue 1.50e-284
Variovorax paradoxus strain MEDvA23 contig_35, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31225.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 97.6
  • Coverage: 497.0
  • Bit_score: 986
  • Evalue 1.30e-284
type VI secretion protein, EvpB/VC_A0108 family similarity KEGG
DB: KEGG
  • Identity: 97.4
  • Coverage: 497.0
  • Bit_score: 985
  • Evalue 4.80e-285

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1494
ATGGCCGAAGCACTCGAACAGAGCGCGCTGAAAGATGTCGCGTACGCGGGCAGCGATTTTTCGTCGCTGCTGCAAAAGGAATTCAAGCCGCGCAGCGACGAAGCCAAGAGCGCCGTCGAGGCCGCCGTGCTCACGCTGGCGCAGCAGGCGCTGAGCAACAGCACCGTCATCGGCAAGGACGTGACCAAGTCGATCCAGGCCATGATCGCCGCGATCGACGCCAAGCTCACCGACCAGGTGAACAGGATCATTCACCACCCCGACTACCAGAAGCTCGAGAGTGCGTGGCGCGGCCTGCACTACATGGTGAACAACACCGAGACCGACGAGCACCTGAAGATCCGCGTGATGGACATCTCCAAGCAGGAGCTGGCCAAGAACCTCAAGAAGTTCAAGGGCGCGGCCTGGGACCAGAGCCCGATGTTCAAGAAGATCTACGAGCAGGAATACGGCCAGTTCGGCGGCGAGCCCTTCGGCGCGCTGGTGGGCGACTACCACTTCGACCAGAGCCCGCCCGACGTGGAACTGCTCGGCGAGATGGCCAAGATCGCGGCCTCCGCGCACGCCCCCTTCATCACCGGCGCGAGCCCGAACCTGATGCAGATGGAGTCGTGGCAGGAGCTGGCCAACCCGCGCGACCTGACCAAGATCTTCCTCACGCCCGAATACGCCGGCTGGCGCAGCCTGCGCGAATCGGACGACGCCAAGTACCTCGGCCTGTGCATGCCGCGCTTCCTGGCGCGCACGCCCTACGGCGCCAACACCAACCCGGTGGAGGAGTTCGACTTCGAGGAAGACACGGCCGGCGCCGACCACGGCAAGTACGCCTGGGCCAACGCGGCCTACGCCATGGCCACCAACATCAACCGTTCGTACAAGCTCTACGGCTGGGGTTCGCGCATTCGCGGCATCGAATCGGGCGGCGCGGTGGAGAACCTGCCGCTGCACACCTTCCCGAGCGACGACGGCGGCGTCGACCAGAAGTGCCCGACCGAGATCGCCATCAGCGACCGGCGCGAGGCCGAGCTGTCGAAGGCCGGGCTGCTGTCGCTCATTCACCGCAAGAACTCCGACTTCGCGGCCTTCATCGGCGCGCAGTCGCTGCACAAGCCGGCGGAGTACGACGACCCCGACGCCACCGCCAACGCCAACCTGGCCGCGCGCCTGCCTTACCTGTTTGCCTGCAACCGCTTCGCGCACTACCTGAAGTGCATCGTGCGCGACAAGGTCGGCAGCTTCAAGGAGCGCGAGGAGATGCAGCGCTGGCTCAACAAATGGATCATGAACTACGTGGACGGCGACCCCGTCAACTCGTCGGAGACCACCAAGGCGCAGAAGCCGCTGGCGGCCGCCGAGGTGGTGGTGGAAGAGGTCGAGGGCAACCCCGGCTACTACACCTCCAAGTTCTTCCTGCGCCCGCACTACCAGCTCGAAGGCCTCACGGTCTCGCTGCGGCTGGTGTCGAAGCTGCCGTCGGCCAAGGGCGGCAAGTAA
PROTEIN sequence
Length: 498
MAEALEQSALKDVAYAGSDFSSLLQKEFKPRSDEAKSAVEAAVLTLAQQALSNSTVIGKDVTKSIQAMIAAIDAKLTDQVNRIIHHPDYQKLESAWRGLHYMVNNTETDEHLKIRVMDISKQELAKNLKKFKGAAWDQSPMFKKIYEQEYGQFGGEPFGALVGDYHFDQSPPDVELLGEMAKIAASAHAPFITGASPNLMQMESWQELANPRDLTKIFLTPEYAGWRSLRESDDAKYLGLCMPRFLARTPYGANTNPVEEFDFEEDTAGADHGKYAWANAAYAMATNINRSYKLYGWGSRIRGIESGGAVENLPLHTFPSDDGGVDQKCPTEIAISDRREAELSKAGLLSLIHRKNSDFAAFIGAQSLHKPAEYDDPDATANANLAARLPYLFACNRFAHYLKCIVRDKVGSFKEREEMQRWLNKWIMNYVDGDPVNSSETTKAQKPLAAAEVVVEEVEGNPGYYTSKFFLRPHYQLEGLTVSLRLVSKLPSAKGGK*