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SCNpilot_cont_300_bf_scaffold_343_curated_23

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 40714..42264

Top 3 Functional Annotations

Value Algorithm Source
fatty-acid--CoA ligase n=1 Tax=Variovorax paradoxus RepID=UPI00037EA407 similarity UNIREF
DB: UNIREF100
  • Identity: 89.3
  • Coverage: 515.0
  • Bit_score: 937
  • Evalue 4.90e-270
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26809.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.4
  • Coverage: 511.0
  • Bit_score: 868
  • Evalue 5.20e-249
ligase similarity KEGG
DB: KEGG
  • Identity: 81.3
  • Coverage: 509.0
  • Bit_score: 850
  • Evalue 3.30e-244

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1551
ATGCGCCTCGTCGATTACCTCGACAAGGGCGCCCAGCTGGGCGCCCATTCTCCTTGCCTGACTCTGGGCGACACCGACCTGAGTTACGCCCAGGTGCAGCGCATCAGCTGGCGCGTGGCTCGCGGCCTGCGGCGCGCCGGCGTGCGGCCGGGGGACAAGGTGGCCGTGCTTTCGAGCAACGATGCAATGGCGTTCGCCACGGTGTTCGGCATCTCGCGCGCTGGCTGCGTATGGTGCCCGATCAACCCGCGCAACGAGGCGAGCGAGAACGCCTTCGTGCTCGACGCCTTCGACTGCGCGTGTTTGCTCTTCCACGGCAACTACGCCGACATGGTCGACCAGATGCGCACGCGGCTGCCCAAGCTGCGCGCACTGGTCTGCCTCGACGCCCGGCAGCTCTTCGCGCCTTCGCTGGACGAGTGGCTGGAAGGACTGGACGATTCGCCCCTGGACATCACGCCGCCCGACGACGTGGCGATGATCGCCGGCACCGGCGGCACCACCGGCCAGCCCAAGGGCGTGATGCTCTCGGGCCGCAACCTCGAGGCGATGTCGGCGCTGACGCTCATGGGCTATCCCTTCGAGGGCCGGCCCGCGTACCTGGCACTCGCGCCGCTCACGCATGCGGCCGGCGTGCTGTGCCTGCCGGTGATGGCGCTCGGCGGGCGGGTGGTGATCATGCCCAAGCCCGACCTGGGCGAGTTCCTCGGGCTCATCGAGGCGCGCCGCATCACCCACACCTTCCTGCCGCCCACGCTCATCTACATGCTGTTGCAGCATCCGCAGCTTGCGTCGACGCAACTCGATTCGCTGCAATGCTTCTGGTATGGCGCCGCGCCCATGTCGGCCACGCGGCTGGAGGAAGCGCTGCAGAAAATCGGCCCCGTCATGGCGCAACTCTTCGGCCAGACCGAGGCGCCGATGATGATCTCGATGATGTCGCCGCGCGAGCACTTCAACGCCGACGGCACCGTTGCGCGCCATCGCCTCTCGTCCGCCGGGCGGCCGGGCCCGCTGGTGCAGGTGGGCGTGATGAACGGCGACGGCGCGCTGCTGCCCGCCGGCGAGAACGGCGAGATCGTGGTGCGCGGATCGCTCGTGATGCAGGGCTACTACAAGGACGCGCGCGCCACCGAAGAGGCGCGCCGCTTCGGCTGGCACCACACGGGCGACATCGGCTACCTGGATGCCGACGGCTACCTGTACATCGTCGACCGCGCCAAGGACATGATCATCTCGGGCGGCTTCAACGTCTACTCCGCCGAGGTCGAGCAGGCGCTGATGCAGCACCCCGACGTGCAGGACAGCGCCGTCGTCGGCCTGCCCGACGAGAAGTGGGGCGAGCGCGTGGTGGCCGTGCTGCAGCTTCAGGCGGGTCGGCAGGTCGATCCGGAGGAGATCAAGGCCTTCGTCAAGTCGCGCATCGGCAGCGTGAAGGCGCCCAAGCAGATCGAGGTGTGGCTCGACCTGCCGCGCTCCAAGGTGGGCAAGGTGCTGAAGAAGGACGTGCGCTCGACCCTGCTGCAGCGAAGCGCCGATCAGCCGCGCTGA
PROTEIN sequence
Length: 517
MRLVDYLDKGAQLGAHSPCLTLGDTDLSYAQVQRISWRVARGLRRAGVRPGDKVAVLSSNDAMAFATVFGISRAGCVWCPINPRNEASENAFVLDAFDCACLLFHGNYADMVDQMRTRLPKLRALVCLDARQLFAPSLDEWLEGLDDSPLDITPPDDVAMIAGTGGTTGQPKGVMLSGRNLEAMSALTLMGYPFEGRPAYLALAPLTHAAGVLCLPVMALGGRVVIMPKPDLGEFLGLIEARRITHTFLPPTLIYMLLQHPQLASTQLDSLQCFWYGAAPMSATRLEEALQKIGPVMAQLFGQTEAPMMISMMSPREHFNADGTVARHRLSSAGRPGPLVQVGVMNGDGALLPAGENGEIVVRGSLVMQGYYKDARATEEARRFGWHHTGDIGYLDADGYLYIVDRAKDMIISGGFNVYSAEVEQALMQHPDVQDSAVVGLPDEKWGERVVAVLQLQAGRQVDPEEIKAFVKSRIGSVKAPKQIEVWLDLPRSKVGKVLKKDVRSTLLQRSADQPR*