ggKbase home page

SCNpilot_cont_300_bf_scaffold_343_curated_24

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(42252..43880)

Top 3 Functional Annotations

Value Algorithm Source
AMP-dependent synthetase n=1 Tax=Variovorax paradoxus RepID=UPI00037520A8 similarity UNIREF
DB: UNIREF100
  • Identity: 88.2
  • Coverage: 541.0
  • Bit_score: 967
  • Evalue 4.70e-279
AMP-dependent synthetase and ligase similarity KEGG
DB: KEGG
  • Identity: 84.7
  • Coverage: 542.0
  • Bit_score: 932
  • Evalue 5.30e-269
AMP-dependent synthetase and ligase {ECO:0000313|EMBL:ADU38476.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 542.0
  • Bit_score: 932
  • Evalue 2.30e-268

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGCCTGCAGCCACCACCGCGGCCGTCACCGGCCTCGCGCCCTCGAGCCCGCGCTTTCATGAGCGCATTTCACGCGTCGCGCTGGGCGACGTGATCCACCGCTCCGCGCGCCGCTTCGGCGAGCGCACGGCGCTGATCGAGGGCGAGCACCGCCTTTCCTACCGCGCGCTCGACGCCGCATCGAACCGCTTCGCGCATCACCTGCTGGACCTGGGCCTCGAAAAAGGCGAGCGCGTGGGCATGCTGTGCAACAACTCCATCCAGATGGTCGTCGCCATGCTGGGCATCCAGAAGGCAGGGCTGGTGTGGGTGCCGATCAACACCGCGCTGGGGGTGGAGGCCATCGGCTACATCCTCTCGCACGCCGAAGTGCGGCACGTGGTGATTGACACCGCGCTGCATGCGAAGCCCGAGCTGCGCGAACTGCTGCAGGCCACTGGCGTGTCGCCCCTGCTGTGCGTGCTCGACGGCGATGCGCCGCCGCCCGGCATTGCTACAGTGCCCCAGGCCATCGCCCAGGGCCCGGAGACGCTGCCCGACGTGGCCATCGACAGCGCGGACCTCGCGCTCATCATGTACACCAGCGGCACCACCGGCCGCCAGAAGGGCGTGATGCATTCGCACGCCTCGGTGCACTCTGTGCTGCTGAGCAACATGGTCGAATGGGGCAGCAGCCCGGAGCGCGCCGACGTGTGGAGCAGCGTGCTGCCGCTCTTCCACTGCGGCCAGCACACGGTGCTGATGTCGGCGCTGGCGGTGGGCGGCGCGCTGGTCGTGCTGCGCGGCTTCGACCCCGGCGCGGTGCTCGCGGCCATCGAGCGCCACAAGATCACCGTGATGGTGGGCCTGCCGATGATGTACGGCGCGCTGCTGGCCCATCCGCAGCGCGCGGCGCGCGACCTCTCGAGCCTGCGGCTGTGCGTGTATGCGATGGCGCCGATGTCGCGCACGCTGCTGCTGCGCCTGCTCGACGAGTTCTGCCCCAACTTCGCGCTGGTCTCGGGCCAGACCGAGATGTACCCGGGCGCCACCATCTTCGAGGCGCACGAGCAGCGCAGGCGCTTCGGCTCCTACTGGGGCGTGGGCACGCTGGTGAACGAAGTCGCGGTGATGGGCGACGACGGCGAACTGCTGGGCACCGACCAGGTCGGCGAGATCGTCTTTCGCGGACCCAACGTGATGCTCGGCTACTACAAGGACCCGGAAGCCACCGCCCATGCGCAGCGCTTCGGCTGGCACCACTCAGGCGACCTGGGCAGGATGGACGAAGACGGGCAGCTCATCTTCCTCGACCGCCTGAAGGACATGGTCAAGTCGGGCGGCGAGAACGTGCCGTCGATCAAGGTCGAGGAAGTACTGCTGCGCCACCCGGGCGTGATGAACGCCGCCGTGGTGGGCCTGCCGCACGAGCACTGGGGCGAGGCCATCACCGCCTTCGTCACGCGCAGGCCCGATGCGCCCGCCGACTTCACCGAAGCGGTGCTCACCGCGCACTGCAAGGAGCACCTCGGAGGCTTCGAGGTGCCCAAGCAGATCATCTTCCTGCCTGCACTGCCGATGACCTCGACCGGCAAGATCCAGAAGTTCGAGCTGCGCAAGGCGCACCACGACCACTATCAGCGCGGCTGA
PROTEIN sequence
Length: 543
MPAATTAAVTGLAPSSPRFHERISRVALGDVIHRSARRFGERTALIEGEHRLSYRALDAASNRFAHHLLDLGLEKGERVGMLCNNSIQMVVAMLGIQKAGLVWVPINTALGVEAIGYILSHAEVRHVVIDTALHAKPELRELLQATGVSPLLCVLDGDAPPPGIATVPQAIAQGPETLPDVAIDSADLALIMYTSGTTGRQKGVMHSHASVHSVLLSNMVEWGSSPERADVWSSVLPLFHCGQHTVLMSALAVGGALVVLRGFDPGAVLAAIERHKITVMVGLPMMYGALLAHPQRAARDLSSLRLCVYAMAPMSRTLLLRLLDEFCPNFALVSGQTEMYPGATIFEAHEQRRRFGSYWGVGTLVNEVAVMGDDGELLGTDQVGEIVFRGPNVMLGYYKDPEATAHAQRFGWHHSGDLGRMDEDGQLIFLDRLKDMVKSGGENVPSIKVEEVLLRHPGVMNAAVVGLPHEHWGEAITAFVTRRPDAPADFTEAVLTAHCKEHLGGFEVPKQIIFLPALPMTSTGKIQKFELRKAHHDHYQRG*