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SCNpilot_cont_300_bf_scaffold_343_curated_41

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 61269..62222

Top 3 Functional Annotations

Value Algorithm Source
Auxin Efflux Carrier n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V945_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 92.7
  • Coverage: 317.0
  • Bit_score: 561
  • Evalue 4.50e-157
Variovorax paradoxus strain MEDvA23 contig_58, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ26823.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.4
  • Coverage: 317.0
  • Bit_score: 564
  • Evalue 1.30e-157
auxin efflux carrier; K07088 similarity KEGG
DB: KEGG
  • Identity: 92.7
  • Coverage: 317.0
  • Bit_score: 561
  • Evalue 1.40e-157

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 954
GTGAATTCGTTCGTCATCTCCTCGCTTCTTCCCGTCGTATTGCTCATCGCCGCGGGCTACCTTGCCGGCAGGCGCCGCTGGATCGGCGGCAACGCGGTGAAGGACCTGTCGAACCTCATCTTCCTGCTGCTCGCGCCCGCGCTGCTGTTTCGCGCCATGAGCACGGTGCACGTCGAACAGCTGAGCCTCAAGCCGGTGGCGGCGTACTTCATCGCCTCGGGCCTGCTGTTCGCGGGCACGATGGCGCTGCGCGGCTTCAACCGCACGGCCGCGGTGATCGCGCTGGCCAACACCTACAGCAACACCGTGATGATCGGCATCGCGCTGATCGGCTTGGCCTATGGCGAGGACGGCATGGTGGTGCTGCTCACGCTCATCTCGCTGCATTCGCTGGTGCTGCTGACCAGCGCCACCGTGGTGCTCGAGCTGGCCGTGGCGCGCGAGCACGCAGCGGCCGGTGACGGTACCGGCAAGCACTCGATGGCGCGCACCGTGCTGCGCGCGCTGCGCAACGCCATCATCCATCCGGTGCCGCTGCCAATCATGGCCGGCCTGTTGTTCGCGCAGACCGGGCTCGTCATGCCCGAGATGATCGACAAGCCGATCCAGCTCCTCGGGCAGGCCTTCGGGCCGGTGGCGCTGGTGATGGTGGGCATCACGCTCGCGCTCACGCCCATCGGCCGGCACTGGCGCGGCGCGCTGGCGCAGGCGCTGGTGAAGAACCTGCTGCATCCGCTGCTGGTGGCGGCCATCGGCTGGGCGCTGGGTGTGCGCGGCATTCCACTCACGGTGATGGTGGTGGCCGCGGCGCTGCCGATCGGCGCCAATGTGTTCCTGTTCTCGCAGCGCTATCGCACCGCCGAAGACCTGGTGACGGCCAGCGTCGCCGTGTCGACGGTGCTGGCCCTGGGCACGCTGACGCTGGTGATGGTGTGGGTGCAGTGGCTGCCCTGA
PROTEIN sequence
Length: 318
VNSFVISSLLPVVLLIAAGYLAGRRRWIGGNAVKDLSNLIFLLLAPALLFRAMSTVHVEQLSLKPVAAYFIASGLLFAGTMALRGFNRTAAVIALANTYSNTVMIGIALIGLAYGEDGMVVLLTLISLHSLVLLTSATVVLELAVAREHAAAGDGTGKHSMARTVLRALRNAIIHPVPLPIMAGLLFAQTGLVMPEMIDKPIQLLGQAFGPVALVMVGITLALTPIGRHWRGALAQALVKNLLHPLLVAAIGWALGVRGIPLTVMVVAAALPIGANVFLFSQRYRTAEDLVTASVAVSTVLALGTLTLVMVWVQWLP*