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SCNpilot_cont_300_bf_scaffold_24_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 13394..14389

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Variovorax sp. CF313 RepID=J3CKJ7_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 329.0
  • Bit_score: 580
  • Evalue 1.30e-162
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EJL73444.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.9
  • Coverage: 329.0
  • Bit_score: 580
  • Evalue 1.80e-162
family 7 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 330.0
  • Bit_score: 557
  • Evalue 3.70e-156

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 996
ATGAAAAGCTTCTTGCCGTGGCGCCGCGCCGGATTCGCGCTGGTGGTGCTGGGATGCGCAATGGCCGCGCAGGCGCAGCAGCAGGTGCTGCAGTTCAAGTGGGGCCATGTCTACGAGCCCGCGAGCATCTTCCACCAGCAGGCCGAACTGGCGGCGCGCAAGATCGCGGAGCAGTCCGACGGCAAGATCAAGATCGAGGTGGTGCCCGCCTCGAAGATGGGGCAGGAGGCCGACTTTCCGCTGATGCTGGCGAACGACTCCATGCAGATCGCCTACGTCGGCGAGGCCACGCTGGCCGAGGGCTATCCGCCGCTGAGCCTGGGCAGCTACCCCTTCGCCTTCAAGGACCTCGACCACATGCGCAAGTACCTGGCGAGCCCGCTGCTGGCCGACCTGATGAAGGGCTACAACGAGAAGAGCGGCAACCGCATGGTGGCCACGGTGTACTACGGCGCGCGGCAGGTCACCTCGGCCAGGCCACTGGCAAAGCCCGAAGACTTCCGCGACCTGCGGCTGTATGTGCCCTCGGCCGCCGCTTACCAGCTCTTCGCCACCGCGCTCGACGCCAAGCCGGTGACGCTGCCTTTCATGAGCCTCTACGGCTCGCTCAAGAAGGGCGAGGTCGAGGCGCAGGAAAACCCGCTGGGCATCGTCAGGTCGAAGAAGCTCTACGAAGTGCAGAAATACGTGCAGCTCACCGCGCACGCCTACGACACGCTGGGCATCGTGATCGGCAAGGCGGCCTGGGCCAGGCTCGCGCCGCCGCAGCAGGCGATGGTCGAGAAGGTGCTCGCCGAAACCGCGAAGTGGACCAACGTCGGCGTGATCGCCGGCGAGCTGGAAGACGAGCAGTTCCTGCGCGGCAAGGGCATGACGGTGACGCCGGTCAACCGCCAGCTGTTTCTCGAGCGCATCGTGAAGCGCGCGACGCCGGAGCAGCAGGGCGCGCGACCGGGCGACTACGCGAAGCTGCAGGCGCTGGCCGGCGCGAACTGA
PROTEIN sequence
Length: 332
MKSFLPWRRAGFALVVLGCAMAAQAQQQVLQFKWGHVYEPASIFHQQAELAARKIAEQSDGKIKIEVVPASKMGQEADFPLMLANDSMQIAYVGEATLAEGYPPLSLGSYPFAFKDLDHMRKYLASPLLADLMKGYNEKSGNRMVATVYYGARQVTSARPLAKPEDFRDLRLYVPSAAAYQLFATALDAKPVTLPFMSLYGSLKKGEVEAQENPLGIVRSKKLYEVQKYVQLTAHAYDTLGIVIGKAAWARLAPPQQAMVEKVLAETAKWTNVGVIAGELEDEQFLRGKGMTVTPVNRQLFLERIVKRATPEQQGARPGDYAKLQALAGAN*