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SCNpilot_cont_300_bf_scaffold_24_curated_17

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(14398..15414)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, AraC family n=1 Tax=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) RepID=Q21WS8_RHOFD similarity UNIREF
DB: UNIREF100
  • Identity: 63.9
  • Coverage: 330.0
  • Bit_score: 420
  • Evalue 1.70e-114
AraC family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 63.9
  • Coverage: 330.0
  • Bit_score: 420
  • Evalue 5.50e-115
Tax=RIFCSPLOWO2_12_FULL_Rhodoferax_60_11_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.5
  • Coverage: 330.0
  • Bit_score: 425
  • Evalue 7.60e-116

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Taxonomy

RLO_Rhodoferax_60_11 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1017
ATGCAAGAGCGCGCCACCGTCCCCGTCAGCTTCCTTCGCGACATGCTCACCGGCGCGCGCCGGCAGCTGCGCGCGCAAGACATCGACGCCATCGCCACGCAGGCTGGCATCTCGCCGCTGCTCCTGCGCCAGGGCGCCGCGCGCGTCACGCGCGAGCAGTTCGTGCGCATGTACGAAGGCGTGGCGCTGTTCATGGGCGACGAGATGCTGGGGCTGTGGTCGCGCCCCATCCGCGCGGGCGCGCTCAAGTACCTGGGCCTGAGCCTGCTCGACGCGCCGTCGCTCATGGTCGCGATGTACCGCTTCACCCGCTTCTGGAACCTGCTGCTCGACGACTACCGGCTGCGCATGGCGCGGGCCAACGGCGTGGCCACCGTCACCATCGCGCCGCGCCTGGACGGCACCACGCCCACGCCCTTCGGCCACGAGCTGATGGTCAAGCTGATCCACGGCGTGGCCTCGTGGCTGGTGGGGCGGCAGCTTCCGGTGCTGGAGGTGGGCTTCGCGTTCCGGCGGCCGGCCAGGTTCGACGAATACGCGAACCTCTTTCCCGGCCCGGTGCGTTTCGGCCAGGCGGCAAGCTCGGTCAGCTTCTCCGAGGCGGTGCTGCGCCAGACCTTCAGGCGCACGCGCGGCGAGCTGCTCGACTTCGTGCGGCGCGCGCCCGACGACTGGATCTTCGTGACCTTCGACCACGACACGACCCGCTCGTCGGTGCGCGACTTCGTGGCCGCGCGCCTGGCCACCGGCGTGACGCTGGGCGACGCCGCCACGTCACTGCACATGTCGGAACGCGCGCTGTCGCGCAAGCTGGCCTCGGAAGGCACGAGCTTTCGCGCGGTGAAGGAAGAAGTACGGCGCGACGTGGCAATCCAGCGGCTGGTGAAGACGCGCGAACCGATCGACCTCATCGCCGCATCGGTTGGCTTCGACAACACGCCGGCCTTTCACCGTGCGTTTCGCACCTGGACCGGCAGCACGCCGCGCGGCTACCGGCTGCGGGCGTCCTCCGACTGA
PROTEIN sequence
Length: 339
MQERATVPVSFLRDMLTGARRQLRAQDIDAIATQAGISPLLLRQGAARVTREQFVRMYEGVALFMGDEMLGLWSRPIRAGALKYLGLSLLDAPSLMVAMYRFTRFWNLLLDDYRLRMARANGVATVTIAPRLDGTTPTPFGHELMVKLIHGVASWLVGRQLPVLEVGFAFRRPARFDEYANLFPGPVRFGQAASSVSFSEAVLRQTFRRTRGELLDFVRRAPDDWIFVTFDHDTTRSSVRDFVAARLATGVTLGDAATSLHMSERALSRKLASEGTSFRAVKEEVRRDVAIQRLVKTREPIDLIAASVGFDNTPAFHRAFRTWTGSTPRGYRLRASSD*