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SCNpilot_cont_300_bf_scaffold_130_curated_6

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(6038..6829)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02028 polar amino acid transport system ATP-binding protein [EC:3.6.3.21] similarity KEGG
DB: KEGG
  • Identity: 94.4
  • Coverage: 252.0
  • Bit_score: 479
  • Evalue 7.70e-133
ABC transporter related n=1 Tax=Variovorax paradoxus (strain S110) RepID=C5D211_VARPS similarity UNIREF
DB: UNIREF100
  • Identity: 94.4
  • Coverage: 252.0
  • Bit_score: 479
  • Evalue 2.50e-132
ABC transporter related {ECO:0000313|EMBL:ACS22931.1}; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.4
  • Coverage: 252.0
  • Bit_score: 479
  • Evalue 3.50e-132

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGACCACGCCCGTTTCACCTACCGCGGGGCGCCCCCTGCCGCCCAAGGACGACACCATGATCCTGTTTTCCGACATCAACAAGTGGTACGGCGACTACCAGGCGCTGGCCGACATCAATGCCGAAGTGAAAAAGGGCGAAGTCGTGGTGGTCTGCGGGCCTTCGGGCTCCGGCAAGTCCACGCTGATCCGCACCGTGAACCGGCTGGAAGAAGTGAAGTCGGGCCAGCTGCTGTTCGACGGCCACGACATCCACGCGCCCATGGGCAGCGCGGCGCTGAACAGGCTGCGCAGCCGCATCGGCTTCGTGTTCCAGAGCTTCAACCTGTTCCCGCACCTGTCGGTGCTGGAGAACATCATGCTGTCGCCGATGCGCGTGCTCGGCGTGAAGCGCGCCGACGCGAAGACCAAGGCCGGGCAGCTGCTCGAGCGCGTGGGGCTTTCGAGCAAGGCGGGCGCCTATCCGGCACAGCTGTCGGGCGGCCAGCAGCAGCGCGTGGCCATCGCCCGCGCGCTGGCCATGGAGCCGCCGGCCATGCTGTTCGACGAACCCACCAGCGCGCTCGACCCCGAGATGGTCGGCGAGGTGCTGTCGGTCATGCGCGGTCTGGCCCACGACGGCATGACCATGATGTGCGTCACCCACGAGATGAACTTCGCCCGCGAGGTGGCCGACCGCATCTGGTTCATGGACGCGGGCCGCATCCTGGAGAAGGCCGACCCCGAGACCTTCTTTCGCAGTCCGCAGCATCCGCGCGCGCAGCGCTTCCTGTCGGACCTTCGCGCGCACTGA
PROTEIN sequence
Length: 264
MTTPVSPTAGRPLPPKDDTMILFSDINKWYGDYQALADINAEVKKGEVVVVCGPSGSGKSTLIRTVNRLEEVKSGQLLFDGHDIHAPMGSAALNRLRSRIGFVFQSFNLFPHLSVLENIMLSPMRVLGVKRADAKTKAGQLLERVGLSSKAGAYPAQLSGGQQQRVAIARALAMEPPAMLFDEPTSALDPEMVGEVLSVMRGLAHDGMTMMCVTHEMNFAREVADRIWFMDAGRILEKADPETFFRSPQHPRAQRFLSDLRAH*