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SCNpilot_cont_300_bf_scaffold_130_curated_5

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(5131..5973)

Top 3 Functional Annotations

Value Algorithm Source
Periplasmic component of amino acid ABC-type transporter/signal transduction system n=1 Tax=Variovorax sp. CF313 RepID=J3CW72_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 95.4
  • Coverage: 280.0
  • Bit_score: 530
  • Evalue 7.60e-148
Periplasmic component of amino acid ABC-type transporter/signal transduction system {ECO:0000313|EMBL:EJL79476.1}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.4
  • Coverage: 280.0
  • Bit_score: 530
  • Evalue 1.10e-147
ABC transporter, substrate-binding protein similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 280.0
  • Bit_score: 519
  • Evalue 7.20e-145

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGTCGAACAAGACCGTCTTCCGCCTCGCCACCATCGGCGCTTGTCTGGGCGCAGCGTCCCTGCTGGCGCACGCCGACCAGTGGAGCGACATCAGCCAGCGCAAGGAGCTGCGCTGCGGCACCTTCGCCGACGTGCCTCCGTTCGCCGCGCCCGACCCGAAGACGCGCGAGATGGTGGGCCACGACGTGGACCTGTGCAATGCCGTGGCCAAGGAGCTGGGCTTGGTCGCCAAGATCACGCCGCTGTCTGTGGAGGCGCGTGTGCCCGAAGTCAAGCTCGGCCGCGTCGACGTGACCATCGCCAACCTGGCCTACACCAAGAGCCGCGGCGAGCAGATCCAGTTCAGCGACCCGTACTACGTGGCCAAGGAAATGCTGGCCGTGAAGGCCTCCGATCCCGGCACGACCAAGGCCGACTTCAAGGGCAAGCGCCTGAGCTCGACCAAGGGCTCCACCTCGGAAATGTCGATCAAGATGAACGGCTCCGAGCCCGTCACCTTCCAGGACACGGGCTCGGCCTTCATGGCGGTGCAGCAGAACAAGTCGGTCGGCATGGTGGCCAACACCATGACCATCACCAAGCTGGTCAACCAGTCGAAGACCGGCGGCGTGGCGCTGAAGATGATCGCCGACCCGATGGTGCTGCAGCCCGTGGGCATCGGCATGAAGAAGGACGAGCCCGCGCTGCTGGCCAAGGTGAACGGCGCGCTCTACGCGCTGGAGAAGTCGGGCGAGCTCGACCGCATCTGGGCCAAGTGGCTGGGCCCGAACACCGAATACAAGATGGTGCGCGAAGAAAAGGTCACGCCGCTGGCGGACCTGAAGTTCGAACTGCTGCCTTGA
PROTEIN sequence
Length: 281
MSNKTVFRLATIGACLGAASLLAHADQWSDISQRKELRCGTFADVPPFAAPDPKTREMVGHDVDLCNAVAKELGLVAKITPLSVEARVPEVKLGRVDVTIANLAYTKSRGEQIQFSDPYYVAKEMLAVKASDPGTTKADFKGKRLSSTKGSTSEMSIKMNGSEPVTFQDTGSAFMAVQQNKSVGMVANTMTITKLVNQSKTGGVALKMIADPMVLQPVGIGMKKDEPALLAKVNGALYALEKSGELDRIWAKWLGPNTEYKMVREEKVTPLADLKFELLP*