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SCNpilot_cont_300_bf_scaffold_130_curated_27

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(25158..26237)

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 359.0
  • Bit_score: 698
  • Evalue 4.90e-198
nitrogen specific signal transduction histidine kinase NtrB; K07708 two-component system, NtrC family, nitrogen regulation sensor histidine kinase GlnL [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 96.9
  • Coverage: 359.0
  • Bit_score: 691
  • Evalue 1.80e-196
Signal transduction histidine kinase, nitrogen specific n=1 Tax=Variovorax sp. CF313 RepID=J2L1P6_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 359.0
  • Bit_score: 698
  • Evalue 3.50e-198

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGGCATTCGGGAAGAAGGCGACCGGCGCCAATCCGCGCTTCCAGTCCTTCGACCTGCTGTCCACCCTCATCGCGGTGGTCAACAGCAACGGCTCCGTGCTGTTCGCCAACGCAGGCCTCGAAGACGCACTCGGCACATCGCGCCGCACGCTCGAAGGCTCGCAGTTCGGCGCGTGCTTTCATGAGCCGCAGGTGCTGCGCACCGCCATCGACGGCGCGAGCAGCAACGACTTCGCCACGCTGCGCTACGAAGCCTTTTTGCGCCGCGTCAACCACGAGCTCATGCCCGTTCAGGTCACGCTGGCGCAGGGCGAGAAGAAGGGCGAACTCATCATCGAGATGTCGCCGCTCGAGCAGCAGGTGCGGCAGGACCGCGAAGAGCGCCTGATCGACCAGGCGCAGGCCAACAAGGAACTCATCCGCAACCTCGCGCACGAGATCAAGAACCCGCTGGGCGGCATCCGCGGCGCGGCGCAGCTGCTGCAGATGGAGGTCGAGTCGCGCGACCTCATCGAATACACCCAAGTCATCATCCACGAGGCCGACCGGCTGCAGACGCTGGTCGACCGCCTGCTGGCGCCGCACCGCCGCCCGCACGTGGTGGGCGACGTCAACATCCACGAGGTGTGCGAGCGCGTGCGCTCCGTCATCCTCGCGGAGTTCCCGCGCGACCTGCACATCGAGCGCGACTTCGACGTCTCCATTCCCGAATTCCGCGGCGACCGCGAGCAGCTCATCCAGGCCACGCTCAACATCGTCCACAACGCCGCGCAGGCCCTGGCGGAGCGCCGCGCGGCGGGCGATGCGCAGATCACTTTCAAGACCCGCGTGGCCCGCCAGGTGATCTTCAACAAGCAGTGGTATCGACTGGCACTGGAATTGCATGTCATCGACAATGGACCGGGTGTGCCGGACACGATCAAGGACCGCATCTTCTATCCGCTCGTATCGGGCAGGGAAGGCGGGACAGGGCTGGGATTGACGCTCGCACAAACTTTTGTGCAACAGCATCACGGCGTGATCGAGTGCGACAGCGTCCCGGGCCGAACCGATTTCAAGATATTGATACCGCTGCCCTAG
PROTEIN sequence
Length: 360
MAFGKKATGANPRFQSFDLLSTLIAVVNSNGSVLFANAGLEDALGTSRRTLEGSQFGACFHEPQVLRTAIDGASSNDFATLRYEAFLRRVNHELMPVQVTLAQGEKKGELIIEMSPLEQQVRQDREERLIDQAQANKELIRNLAHEIKNPLGGIRGAAQLLQMEVESRDLIEYTQVIIHEADRLQTLVDRLLAPHRRPHVVGDVNIHEVCERVRSVILAEFPRDLHIERDFDVSIPEFRGDREQLIQATLNIVHNAAQALAERRAAGDAQITFKTRVARQVIFNKQWYRLALELHVIDNGPGVPDTIKDRIFYPLVSGREGGTGLGLTLAQTFVQQHHGVIECDSVPGRTDFKILIPLP*