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SCNpilot_cont_300_bf_scaffold_130_curated_28

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(26266..26775)

Top 3 Functional Annotations

Value Algorithm Source
signal peptide protein n=1 Tax=Variovorax paradoxus RepID=UPI0003659150 similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 168.0
  • Bit_score: 296
  • Evalue 1.50e-77
signal peptide protein similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 1.00e-77
Putative signal peptide protein {ECO:0000313|EMBL:ACS18284.1}; Flags: Precursor;; TaxID=543728 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain S110).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.3
  • Coverage: 168.0
  • Bit_score: 295
  • Evalue 4.60e-77

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 510
ATGAAGACAGCTTCCCTCTTTTTCCTGGCCGGTTCACTCCTGATCGCGTTGCCGGCGGTTGCGCAGGAACGCGTCTGGCGCTGCGGCAACGAATACACCAACAACGCGACCATCGCCCAGCAAAAGGGCTGCAAGGTGCTCGAAGGCGGCAACGTCACCGTCGTGCAGGGCACCAAGGCTTCGGGCGGCGGGTCGGCATCGTCGTCGGGCTCTTCCTCGGCGGCGCGCGCGCCGGCCGGCAGCCCGCGCGTCGAAGGCGTCGACCAGCGCGCCCGCGACGGCGAGGCCCGCTCGGTGCTCGAATCGGAGCTCAAGAAGGCCGAGGCCCGCCAGGCCGAGCTGCTGAAGGACTACAACAACGGCGAGCCCGAGAAGCAGGGCAGCGAAGGCCGCAACTACCAGAAGTACCTCGACCGCGTGGCCGACATGAAGGCCGAGATCGCGCGCAACGAGAGCGACATCGCAGGCATCCGCCGCGAAATCAACCGGCTGCCGCCCCGGCAGCAATAA
PROTEIN sequence
Length: 170
MKTASLFFLAGSLLIALPAVAQERVWRCGNEYTNNATIAQQKGCKVLEGGNVTVVQGTKASGGGSASSSGSSSAARAPAGSPRVEGVDQRARDGEARSVLESELKKAEARQAELLKDYNNGEPEKQGSEGRNYQKYLDRVADMKAEIARNESDIAGIRREINRLPPRQQ*