ggKbase home page

SCNpilot_cont_300_bf_scaffold_22_curated_3

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 993..3395

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane protein assembly factor BamA n=1 Tax=Variovorax sp. CF313 RepID=J3CXB1_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 92.8
  • Coverage: 800.0
  • Bit_score: 1501
  • Evalue 0.0
Outer membrane protein assembly factor BamA {ECO:0000256|HAMAP-Rule:MF_01430, ECO:0000256|SAAS:SAAS00011174}; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 800.0
  • Bit_score: 1501
  • Evalue 0.0
outer membrane protein assembly complex, yaet protein; K07277 outer membrane protein similarity KEGG
DB: KEGG
  • Identity: 86.6
  • Coverage: 800.0
  • Bit_score: 1414
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2403
ATGCATCTACCGAAGTCCCTCGCAGCGGCCGCCGTGCTGCTCGCCTCGCTGGCGGCCCTCCCCGCATGGGCCACCGATCCTTTCACCGTCAAGGACATCCGCCTCGAAGGCCTGCAGCGCGTCGAGCCCGGCACCGTGTTCGCCACCATGGGCCTTCGCACCGGCGACACCTACAGCGACGAGCGCGGCGCCAACGCCATCCGCGAGCTGTTCAAGCTGGGCCTGTTCAAGGATGTGCGCATCGACGTGAACGGCAACGTGCTGGTGGTGGTGGTCGAGGAGCGCCCCGCCGTCGCCGACGTCGACTTCGTGGGCGCCAAGGAGTTCGACAAGGCCGCGCTGCAGAAGGCGCTGCGCGAGATCGGCCTGGCCGAGGGGCAGGCCTTCGACAAGGCGCTGGCCGACCGCGCCGAGCAGGAGCTCAAGCGGCAGTACATCAGCCGCAGCTTGTACAACGCACAGGTGATCACCACCGTCACGCCGCTGGAGAACAACCGCGTGAACCTGACCTTCACGGTGACCGAAGGCGAGCCCGCGCGCATCAGGGAAGTGCACGTGGTGGGCAACAAGGCCTTCAGCGAAAGCACGCTGCTCGACCTGTTCGACCAGGACACCGGCGGCTGGCTCGCCTGGTACACGAAGTCGAACCAGTACTCGCGCACCAAGTTCAGCGGCGACATGGAAACGCTGCGCTCCTTCTACATCACGCGCGGCTATCTGGAGTTCCGCATCGACTCGACGCAGGTGGCCATATCGCCGGACCGGCAGACCATCGTGCTGACCATCAACATCACCGAGGGCGAGAAGTTCGCGGTGGCCGGCGTGAAGCTGGCGGGCGACTACATGGGCCGCGACGACGAGTTCAAGACCCTGGTCACCATCCGCCCCGGCCAGCCCTACAACGGCGAAGCCGTGGCCGCCACCACCAAGGCCTTCACCGACTACTTCGGCACCTTCGGCTATGCCTTCGCGCGCGTGACGGCGGAGCCCGAGATCGACCGCGCGAACAACCGCGTCACCCTCGTGCTGAAGGCCGAGGCCTCGCGGCGCGCCTATGTGCGTCGCATCAACATCGGCGGCAACGCCAAGACGCGCGACGAAGTGATCCGCCGCGAGTTCCGCCAGTACGAAGGCGCCTGGTACGACGGCAACAAGATCAAGGCCTCGCGCGACCGGATCGACCGCCTGGGCTTCTTCACCGACGTGAGCGTGGACACCATCGACGTGCCCGGCTCGCCGGACCAGGTCGACCTGGCGGTGAACGTGACCGAGAAGCCCACCGGCTCGCTGCAGCTGGGCGCGGGCTATTCGTCGACCGACAAGGTGTCGCTGAGCTTCGGCATCACCCAGGAGAACGTGTTCGGCAGCGGCAACTACCTGGGGCTGAACGTGAACACCAGCTCGTACAACCGCACCATCTCGCTCACGGCCACCGACCCTTACTTCACCAAGGACGGCATCTCGCGCACGCTGAACGTGTTCCACACCACCACGCGCCCCTACTACGAGGCCGACGGCAACTACAAGCTGGCCAGCGACGGCGGCTCGGTGCGCTTCGGTTTCCCGGTGGGCGAGCAGGACACGGTGTTCCTGGGCATCGGCGTGGAGCGCTATTCGTTCACGCCCGGCACCAACGGCACCTATGCGCTGGTCGATGGCTCCTACGTGTACACCGCCACGCCGCAGGCCTACCTCGACTACTTCAAGTGCACGGGCACCGCGCCGAGCGTGACCTGCGCGAAGTCGAGCGTGGTGGGCATCCCGGCCACGCTGGGCTGGTCGCGCGACGACCGCGACAGCGCGCTGGTGCCCACGCGCGGCAAGCTGCAGAGCGCCAACCTCGAAGTGGGCGTGGGCAGCGAGCTGCGCTACCTGAAGACCAACTACCAGTACCAGCAGTACTTTCCGCTGTCCAAGCAGTACACGCTGGCCATCAACGGCCAGCTGGGCTATGCGCGGGCGCTGGGCGACAGCACCTACCCGATCTTCAAGAACTTCTACGCCGGCGGCCTGGGCTCGATCCGCGGCTTCGAGCAGAACTCGCTGGGCCCGAAGGATTCGGTCACCGACGGCGCCCTGGGCGGCACGCGCAAGGCGATCTTCAACATGGAGTTCAGCACGCCCTTCCCCGGCGCGGGCAACGACCGCACGCTGCGGCTCTACACCTTCCTGGACGCGGGCAACGTGTTCGCCGATCGCACCGCCAGCATGACGGACGCGCAGTGGAAGGCGCAGAACCGCCTGCGCGCCTCTGCCGGCATCGGCATCAGCTGGATCTCGCCGCTGGGGCCGCTGCGGCTGGCGTACGCGGTGCCGCTGCTCTACCAGAAGGAAGACACGGCCAACAACATCGCGGCCGACCGCACGCAGCGCTTCCAGTTCCAGATCGGAACGTCTTTCTGA
PROTEIN sequence
Length: 801
MHLPKSLAAAAVLLASLAALPAWATDPFTVKDIRLEGLQRVEPGTVFATMGLRTGDTYSDERGANAIRELFKLGLFKDVRIDVNGNVLVVVVEERPAVADVDFVGAKEFDKAALQKALREIGLAEGQAFDKALADRAEQELKRQYISRSLYNAQVITTVTPLENNRVNLTFTVTEGEPARIREVHVVGNKAFSESTLLDLFDQDTGGWLAWYTKSNQYSRTKFSGDMETLRSFYITRGYLEFRIDSTQVAISPDRQTIVLTINITEGEKFAVAGVKLAGDYMGRDDEFKTLVTIRPGQPYNGEAVAATTKAFTDYFGTFGYAFARVTAEPEIDRANNRVTLVLKAEASRRAYVRRINIGGNAKTRDEVIRREFRQYEGAWYDGNKIKASRDRIDRLGFFTDVSVDTIDVPGSPDQVDLAVNVTEKPTGSLQLGAGYSSTDKVSLSFGITQENVFGSGNYLGLNVNTSSYNRTISLTATDPYFTKDGISRTLNVFHTTTRPYYEADGNYKLASDGGSVRFGFPVGEQDTVFLGIGVERYSFTPGTNGTYALVDGSYVYTATPQAYLDYFKCTGTAPSVTCAKSSVVGIPATLGWSRDDRDSALVPTRGKLQSANLEVGVGSELRYLKTNYQYQQYFPLSKQYTLAINGQLGYARALGDSTYPIFKNFYAGGLGSIRGFEQNSLGPKDSVTDGALGGTRKAIFNMEFSTPFPGAGNDRTLRLYTFLDAGNVFADRTASMTDAQWKAQNRLRASAGIGISWISPLGPLRLAYAVPLLYQKEDTANNIAADRTQRFQFQIGTSF*