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SCNpilot_cont_300_bf_scaffold_22_curated_4

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 3412..4128

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V107_VARPE similarity UNIREF
DB: UNIREF100
  • Identity: 74.4
  • Coverage: 238.0
  • Bit_score: 334
  • Evalue 8.90e-89
winged helix family two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 74.4
  • Coverage: 238.0
  • Bit_score: 334
  • Evalue 2.80e-89
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ADU39030.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax paradoxus (strain EPS).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 74.4
  • Coverage: 238.0
  • Bit_score: 334
  • Evalue 1.20e-88

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
ATGGGTCGCATCCTGCTGGTGGAGGACGGGCGCGACAGCGCCTCCCAGTTGCTCGCGCACCTGCACGGCGCGGGCCACGAGGTCGAGCAGATCGGGGACGGCGCGGCGGCGCTGGAGCGCATCCTGACGGCGCCGCCCGCGCTCACGCTGCTGGACATCGTGCTGCCGCGCGGCGTGAACGAGGAAGGCGGCGAAGACGGCATCGAGGTGCTGCGCAAGGTGCGCTCGCACGGCAACAACCACCCGGTCATCATGCTGACGGCCCGCGCTCAGGAGTCGGACCGGCTGCTCGCGCTCGACATGGGCGCGGACGACTACGTCTGCAAGCCCTTCTCGCCGCGCGAGGTGGTCGCGCGCGTGAACACGGTGCTGCGCCGCTATGCGCAGCGCGAGGCGGCCGGGCGACCGTCAGCCGCGGTGAACTTCACCAGCGCATCCGGGGCGCAGGGCAATGCATGGCTGGAAGGCCAGGCGCTCGCGCTCACGCGCCGAGAGCTGCTGTTGCTGCGCGCGCTGTCGAACGACCCGGGCCGGGTGTTCACCCGCTCGAAGCTGCTGGAGGCCGCGTTCCCCGAAGCGCTCGATGTCAACGAGCGCGCGGTGGACGGGCACATCAAGAACCTGCGCAAGAAGCTGGCGGACGTCGCGCCCACGCACGACTGGATCCGCTCGGTCTACGGCGTGGGCTTCAGCTTCGCGGAGCGGCCGGCCTGCTGA
PROTEIN sequence
Length: 239
MGRILLVEDGRDSASQLLAHLHGAGHEVEQIGDGAAALERILTAPPALTLLDIVLPRGVNEEGGEDGIEVLRKVRSHGNNHPVIMLTARAQESDRLLALDMGADDYVCKPFSPREVVARVNTVLRRYAQREAAGRPSAAVNFTSASGAQGNAWLEGQALALTRRELLLLRALSNDPGRVFTRSKLLEAAFPEALDVNERAVDGHIKNLRKKLADVAPTHDWIRSVYGVGFSFAERPAC*