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SCNpilot_cont_300_bf_scaffold_22_curated_7

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 5189..6949

Top 3 Functional Annotations

Value Algorithm Source
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=1144315 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovorax sp. CF313.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.7
  • Coverage: 535.0
  • Bit_score: 883
  • Evalue 1.80e-253
integral membrane sensor signal transduction histidine kinase; K07642 two-component system, OmpR family, sensor histidine kinase BaeS [EC:2.7.13.3] similarity KEGG
DB: KEGG
  • Identity: 80.7
  • Coverage: 539.0
  • Bit_score: 852
  • Evalue 5.70e-245
Signal transduction histidine kinase n=1 Tax=Variovorax sp. CF313 RepID=J2L4M2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.7
  • Coverage: 535.0
  • Bit_score: 883
  • Evalue 1.30e-253

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Taxonomy

Variovorax sp. CF313 → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1761
ATGGAGGGCCCCGGCCGGGATTTCTCCCAATTTCCTCCACATTCCGCCGACACCATCGGCGTCCTGCCCCCCTCTTTCGTCCACCGCCGCCCGCCCTTTTCGCCCGACTCCCCGGTCGCCATGCATGCCGCAGAATGCGGCCATGCCCGTGCCTTGCCCATGCCGCAACTGACCCTTTCCCGCAAGATCTTCCTGGCGCTGGCCGCCCTGCTGCTGGTGCTGCTCATCAGCTTCGCGGGGCTGTCGATCATTGCGCTGCAGCGGGGACTGGGCTCCTACGTGGCCGAGATCGAGATCCGGCGCATGGACTGGCTCGCGCAACTGGTGCTGAAGAACTACGTGGCCCACGGCGACTGGAAGAACCTGCGCGACAACGACGACGCCTGGCAGCGCCTGCAGATGGGCCGCTTCGCGAGCCTGCTCGACAGCACCGCCGCCAACGGCGACGAGCGGCGGCTGCCGCCCTGGTACGAATACCGCACCATGCGCCCCGAGCCGCCGCCGGACGGCGCGCCCACCGGTGCCCCCGCTGGAGCGCCCAACGGCGACCCGCCGCCCATGCCACCCTCCCCGCAGCTCGACCTGCTGCCGCGCCGCATGCTCGGCGCGCCGCCGCCCTGGGTGTTTCCCGACCCGCGCGGCATGCACGATTCCATCTACCAGCGCCTGGCCGTGCTCGACGCGAGCGGTGCGCGCGTGGTGGGCGCCGACATCGACATGGCCAACGCCGCGCGCATGCCGATCCGGCACAACAAGTCGGTCATCGGCTACCTCGCGCTGGCGCCGCTGCAGGGGCTGGAAAGCGAAGCCGACCGCGCCTTCATCGCGCGCCAGTCGGGCGTGATCGTGCTCACCGGCCTGTGCGGACTGGGCTTCGCGCTGGTGCTGTCGTGGCTGCTCGCGCGCCGCTGGTTCAGGCCCATCGACGAACTCACGCAGGCCGCGCAAGACGTGGCGCAAGGGCGGCTTTCCACCCGCGTCGCGGTGCAGGGCTCGGACGAACTCGCGCTGCTGGGCAAGACCTTCAACGACATGGCGCAGCGCCTGGACACCGTCGAGGCCTCGCGCCGCGCCTGGCTGGCCGATGCGGCACACGAGCTGCGCACGCCGCTGGCCGCCATGCGCGCCGAGATCGAGGCCCTGCAGGACGGCGTGCGCACCTTCGACGAGCGCACCGCGCTGCGGCTGCACCGCCAGGTGATCCGCCTGGGACAGCTGGTCGACGACCTGCGCAGCAGCATGCGCGAACCGCAGAGCGACCTGCTCACGACCACGGTGTTCCCGCTGTCGCTGCTGAAGGAAGCACTGGACCACACGCGCGACCGCTTCGCCAAGCGCGGCATCGTGGTCGACCGGCATGCGGTCGACCATGTCACGGCCTCGGCGCAACCGGTGATCGACGGCAATGCGCACCGGCTGCACCAGGTGTTCATGAACCTGCTGGAGAACACGCTGGCCTACACCGACGAAGGCGGCAAGCTGCGGCTGGACGTGATCGTCGAAGGCGCATGGACCGGCAACTGCCTCACGCTGCTGTTCGACGACAGCGCGCCCGGCGTGCCCGACGAGGAGCTGCCGCGCCTGTTCGACCGCCTGTTCCGCGGCGAGACCTCGCGCAGCCGCGAGCACGGCGGCTCCGGCCTCGGCCTGTCGATCTGCCGCGCGACCATCGAGGCGCACGGCGGCACCATCGAAGCGTCGGCTTCGCCGCTCGGCGGGCTGCGCGTGACCATCACCCTGCCACTGGCCACATCCTCATGA
PROTEIN sequence
Length: 587
MEGPGRDFSQFPPHSADTIGVLPPSFVHRRPPFSPDSPVAMHAAECGHARALPMPQLTLSRKIFLALAALLLVLLISFAGLSIIALQRGLGSYVAEIEIRRMDWLAQLVLKNYVAHGDWKNLRDNDDAWQRLQMGRFASLLDSTAANGDERRLPPWYEYRTMRPEPPPDGAPTGAPAGAPNGDPPPMPPSPQLDLLPRRMLGAPPPWVFPDPRGMHDSIYQRLAVLDASGARVVGADIDMANAARMPIRHNKSVIGYLALAPLQGLESEADRAFIARQSGVIVLTGLCGLGFALVLSWLLARRWFRPIDELTQAAQDVAQGRLSTRVAVQGSDELALLGKTFNDMAQRLDTVEASRRAWLADAAHELRTPLAAMRAEIEALQDGVRTFDERTALRLHRQVIRLGQLVDDLRSSMREPQSDLLTTTVFPLSLLKEALDHTRDRFAKRGIVVDRHAVDHVTASAQPVIDGNAHRLHQVFMNLLENTLAYTDEGGKLRLDVIVEGAWTGNCLTLLFDDSAPGVPDEELPRLFDRLFRGETSRSREHGGSGLGLSICRATIEAHGGTIEASASPLGGLRVTITLPLATSS*