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SCNpilot_cont_300_bf_scaffold_22_curated_15

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(17454..18146)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI00037FD53B similarity UNIREF
DB: UNIREF100
  • Identity: 47.7
  • Coverage: 222.0
  • Bit_score: 199
  • Evalue 4.30e-48
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ERJ33818.1}; TaxID=1335308 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia sp. AU4i.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 47.4
  • Coverage: 215.0
  • Bit_score: 193
  • Evalue 2.50e-46
TetR family transcriptional regulator; K09017 TetR/AcrR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 48.3
  • Coverage: 203.0
  • Bit_score: 192
  • Evalue 1.70e-46

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Taxonomy

Burkholderia sp. AU4i → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 693
ATGAGCGCCGTTCGCCCCCCCGCGGTGAAGCGCCAGGCCCGCCGTCAGAACATCGAGAGCGCGATCCTCGCGGTCGCGCAGGAGCGCTTCGCGCTGCAGGGCTACGGCGGTGTCTCCATCGACGACATCGCGGCCGAGGCCGGCATCTCCAAGCAGAGCCTGCTGTACTACTTTCCTTCGAAGAAGGCGCTGTACCGGCGCGTCTTCAACGACGTGCTCGACTCCTGGCTGTCCAACCTCGACAGCCTGGCCGCGGCCGACCTGGAGCCGCATGCCGCGCTGGAGCGCTACGTCACGCAGAAGCTGCAGTTCTCGTACGACCATCCCTCGGGCTCGCGCCTGTTCGCGCAGGAAATCATCTCGCAAGCGCCGCAGTGCGGCGACGACATCGAGGCCAAGCTGGTGCCCGCATTCCGCGCCGAGGCCGCCGTGCTGCATCGCTGGATGAGCACCGGCCACGCCGCGCCGCTGCCCGTGGCGCACCTGCTGTTCACGCTGTGGGCCATGACGCAGACCTATGCCGACTTCGCGTGGCAGATGCGCATGCTGCTCGGCAAGAAGGCGCTGGAACCGGCCGACTTCGACCTGGCGCGCGAGACCATCATGCGCATGCTCGAAGGCGCGCTGGGTCTGACGCGACCGGCCACGTCGGCGGTGGTGACGAGCCGGCCGGAGCCGCTGCCTGAAAAATAG
PROTEIN sequence
Length: 231
MSAVRPPAVKRQARRQNIESAILAVAQERFALQGYGGVSIDDIAAEAGISKQSLLYYFPSKKALYRRVFNDVLDSWLSNLDSLAAADLEPHAALERYVTQKLQFSYDHPSGSRLFAQEIISQAPQCGDDIEAKLVPAFRAEAAVLHRWMSTGHAAPLPVAHLLFTLWAMTQTYADFAWQMRMLLGKKALEPADFDLARETIMRMLEGALGLTRPATSAVVTSRPEPLPEK*