ggKbase home page

SCNpilot_cont_300_bf_scaffold_22_curated_16

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: comp(18143..19594)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, GntR family with aminotransferase domain n=1 Tax=Burkholderia phytofirmans (strain DSM 17436 / PsJN) RepID=B2TEU5_BURPP similarity UNIREF
DB: UNIREF100
  • Identity: 33.6
  • Coverage: 461.0
  • Bit_score: 234
  • Evalue 2.50e-58
Transcriptional regulator, GntR family with aminotransferase domain containing protein {ECO:0000313|EMBL:KIG07589.1}; TaxID=870478 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source="Burkholderia sp. MR1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 469.0
  • Bit_score: 252
  • Evalue 1.30e-63
GntR family transcriptional regulator with aminotransferase domain similarity KEGG
DB: KEGG
  • Identity: 33.6
  • Coverage: 461.0
  • Bit_score: 234
  • Evalue 7.90e-59

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Burkholderia sp. MR1 → Burkholderia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1452
ATGCAAGGTTCACGCGGCAACGCCACGGCGTTGCTCAAGCCGGCACAGGCCGGCGCCGGATGGATGCAAGGCCTGATGGGCGAGATGGACGATGCCGCCCCCGGCCTCGGGCTGGCGCAACGCCTGGTGGTGGGGGTCGAACTGCGGGTGAGCGACGGGCGTCTCGCACCCGGCACCAAGATGCCTTCGGTGCGCGCGCTGGCGGGCAAGCTGGGCATCAGCACCTTCACCGTCACCGAGTCGTACAGCGCGCTGCGTGCGCGCTCCGTGCTGGCCTCGCGGCCGGGCAGCGGCTACTACGTGCTGCACCGGCCCGCGCGCGCGGCCGACGAGCCCGAGGCGGTGCCGCGCATCGCCGACCCTTCCCCCGGCAATGACCGGCCGCCTCCGCCCGAGTACCGCGGCGACGACCTGGTGCGCGAAGCGATGCGCCGCGTCGCGCGCACAGCGCCCGAGTGGGACGGCGGCGCGCGCCCCGGCTTTGGCCTGACGCGGCTGCGCGAACTGATCGCGGCGCGCCATCGCACCGAGCTGCCCGCGCTGGTGCCGCAGCAGGTCATGACCGCCGCGGGCAGCCTTGGCGCCGCCATGTGCCTGCTGCAGGCATGGACAGAGCCGGGCGACGCGGTGCTGGTCGAGTCGCCCGCGTCGCGCCAGTTGCGCAACCTGATCCTCACGCTGGGCCGGCGCATCCTCGAAGTGCCTCGGCGCGGCGGCTGCCTCGATATCGCGGCGCTCGACGGCCTCGCGCCGCAACTGCCCTGCGAAGCGCGCAGGCGTCTGCTGTTCGTGTCGACGGCGGTGTCGAACCCGCTCGGCATCTGCATGAATCCGCAGGGTGCGCACCAGGCGCTGCAGGCGGCCGAGCGGCACGACCTGCGCGTGGTCGAACTCGACAGCTGGCGAAGCCTTTCGCCGCTGCAGGCGCCGAGCCTCGCGGCGATGGACGGGCTGCAGCGCGTGGCGCAGATCGGCAGCGTGTCGACCACGCTGTCGGCCAGGCTGCGGCTGGCCCATGTGCTGCTGCCGCTACGCTGGTGCGACGACGCCGCGCTGCGCTGCCTGCACACCACGCTGGGGCCGAGCGAGTTCGAGGAGCGCGTGGCCTGCGAGGTGCTGTCCGATGCGGGCTATCCGCGCTTCCTGCAGAAGCTCAACACCGCGCTGAAGATCGCGGGCGAGCGCACGCTGTCGCTGCTGACGGGCGCCGGGCTGCAGGCGCTGCACGTGCCCGACGGCGGCCCGTTCCTCTGCGCCGGCTGGTCGCCCGGCAGCGAGCCGAGGCCCTCCGCCGACGCGGTGCTGCAGGAGGCGCGAAAGCAGGGCCTGCCGCTCGCGGCGGCGAGCGACTTCGGCAGCGCGCCACAGCCCTTCGCGTGGTACCGCTTCAACGTCACGCAGTGCGGCGACGAGCGGCTGGTTCGCTTTCTTGCGCGGATGAAGAACCCATGA
PROTEIN sequence
Length: 484
MQGSRGNATALLKPAQAGAGWMQGLMGEMDDAAPGLGLAQRLVVGVELRVSDGRLAPGTKMPSVRALAGKLGISTFTVTESYSALRARSVLASRPGSGYYVLHRPARAADEPEAVPRIADPSPGNDRPPPPEYRGDDLVREAMRRVARTAPEWDGGARPGFGLTRLRELIAARHRTELPALVPQQVMTAAGSLGAAMCLLQAWTEPGDAVLVESPASRQLRNLILTLGRRILEVPRRGGCLDIAALDGLAPQLPCEARRRLLFVSTAVSNPLGICMNPQGAHQALQAAERHDLRVVELDSWRSLSPLQAPSLAAMDGLQRVAQIGSVSTTLSARLRLAHVLLPLRWCDDAALRCLHTTLGPSEFEERVACEVLSDAGYPRFLQKLNTALKIAGERTLSLLTGAGLQALHVPDGGPFLCAGWSPGSEPRPSADAVLQEARKQGLPLAAASDFGSAPQPFAWYRFNVTQCGDERLVRFLARMKNP*