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SCNpilot_cont_300_bf_scaffold_22_curated_32

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 40124..42580

Top 3 Functional Annotations

Value Algorithm Source
ligand-gated channel protein n=1 Tax=Variovorax paradoxus RepID=UPI00038081AB similarity UNIREF
DB: UNIREF100
  • Identity: 72.6
  • Coverage: 782.0
  • Bit_score: 1179
  • Evalue 0.0
TonB-dependent siderophore receptor; K02014 iron complex outermembrane recepter protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 830.0
  • Bit_score: 1126
  • Evalue 0.0
TonB-dependent siderophore receptor {ECO:0000313|EMBL:AEF90613.1}; Flags: Precursor;; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain Cs1-4).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 830.0
  • Bit_score: 1126
  • Evalue 0.0

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Taxonomy

Delftia sp. Cs1-4 → Delftia → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2457
ATGACCCAGCAGCACCACGGCGCGCAACGCTTCCGCGCCGATTCCTTTCCCCTTGCGGCGCTCGCCTGCGCCGTCGCTTCAGCCTTGCTCGTGATGGGCGGCACGGCGCATGCGCAGGAGGCGAGCGCGTCGCCGCCGTCGGCGCCCACGGCCGTTTCTTTGTCGCTGCCCTCGCAGCCCCTGGCACAGGCCCTGGGCGTGCTCTCGCGGCAGTACGGCACCGCCATCGGCGGCGAGAGCTCGCTGCTCGAAGGCCGCACCGCGCCCGCCGTGCGTGGCACCGTCACGCTGCAGCAGGCGCTCGAGCGCGTGCTCGCGGGCAGCGGCCTCACCGTCGTGCGCAGCGGCGCCTCGGGCTTCACCGTGATCCGTGCCGCCGCGGCAGGCACCACCACCCTGGCCCCGGTCACGGTGACGGCCGACGCCGAGGAAACCGCGACCGCCCACATGCCGGGCTACATCGCGCGGCGCAACACCACCGGCAGCAAGACCGACACGCCCATCATCGAGACGCCGCAGTCGATCTCGGTGGTGACGGCCGACTTCATCGAGGCGACCGGTGCCACGCGGCTGAAGGAAGCGCTGGCCTATACGCCGGGCATCAACGTGTCGCCGTGGGGAGCGGACTCGCGCTTCGACTGGACCATCCTGCGCGGCTTCGACGCGCAGGCACCCGGCTACTACCTCGACGGGCTGCAGCTGCGCAACAACAACGGCTGGGCCATCTGGCAGACCGAGAGCTACGGGACCGAGCGGGTCGAGGTGCTGCGCGGCCCCAGCTCGGTGCTGTACGGACAGAACGGGCCGGGCGGCATGATCAACGTTGTCAGCAAGCGCCCCACCGAGGAACCGCTGCACGAGCTGCAGGTGCAGTTCGGCGACAACGCGCGCCGGCAGATCGCGGGCGATTTCTCGGGCCCGCTGGATGCAGAGGGCAAGGTGCTCTACCGCCTCACGGGGCTGGTGCGCGACGCAAAGCTGCCGGCCAGCGGCCTGCCGAACGACCGCACATTCCTCGCGCCCGCGCTCACCTGGAAGCCCTCCGGCGACACCACGCTCACGGTGCTGTCGCACTACCTGCGCGTTCGCGACGGCAGCTCGTACGGCAGCTTTCCCGAAGTGGGCACGCTGCTGCCCAACCCCAACGGCCGGTTCTCGCCCAAGACCTATGTCGGAGACCCCAACTTCGACCGCTTCAACCAGGACCAGTGGATGCTCGGCTACCTGCTCGAGCACCGCCTGAACGACACCTTCACTTTCCGCCAGAACGCGCGCATCGGCTCGAACAAGGTCGACTACGGGCAGGTCTTCAACCAGCCGAACTTCGTCACCGTCGACCCCGACAACGCCGACAGCCCGGCCAACTATCGGGTGCTGAGCCGCTTCCCCTTCGCGAGCAAGGAAAAGTCGCGCATCGCCTCCATCGACAACCAGCTGCAGGCCAGGCTGCACTGGGGCGACTGGCAGCACACGCTGCTGTTCGGGCTCGACTACCAGCGCTCGCGCAACGACCAGCGCACGTCCAACAGCGGCACGGTGCCCGACATCGACGGCTACCTGCCGGTGCACGAAGGCTTCGTGACCACCGCCGACCCGTGGTTCGACGCGCGCACCACGCTGTCGCAGACCGGCTTCTACATGCAGGACCAGATCAAGTGGGGCGACTGGGTCGCCACGCTGGGCGGGCGTTACGACAGCGCCAGGGCCGTGTCGTACAGCCACATCGACGGCAGCACCACGCGCGTTTCTGACCACAAGTTCACCAGCCGCGCGGGGCTGGTCTACCTGCACCCGAGCGGATGGGCGCCGTACTTCAGCTACTCCGAATCGTTCTCGCCCACGGTCACCATCGATCCGCAGACGCAGCAGCCGCTGAAGCCCGAGACGGGCCGGCAGTACGAGGTGGGCGTGCGCTACCAGCCGGCGGGCCGCAAGGACAAATACAGCGCCGCCGTCTTCGACCTGCGCCGCCAGAACTACATCACCTACGACGCCGACTTCGTGCCCAAGCAGACCGGCGAGATCCTGGTGCGCGGGCTGGAGCTGGAAGCATCGTTCGAGCCGATGCCGCGCATGAACGTCACGGCCGCCTACACCTACACGCCGAAAGCCGTCGTCACCGCCAGCAGCACGGCGAGCGACATCGGCAAGCAGATGCAGGCGGTGTCGCGCAACCAGCTGTCGGTGTGGGCCGACTATCGCTTTTCCAACGGCGTGAAGACGGGTCTGGGCGTGCGCTTCATGGGATCGAACCGGGGCTACCAGGAAAGCACGAAGGTGCCGGTGCCGTCATACGCGGTGTTCGACGCGCTGGTGGGCTACGACTTCGAGCGCTGGAACCTCGCGCTCAACCTGCGCAACCTGGGGAACAAGACCTATGTGGCGAACTGCAGTTCAGGCAGCTGCTACTACGGCGAGCCACGCAAGGTGCTGGTGACGGCGACCTACCGCTGGTAA
PROTEIN sequence
Length: 819
MTQQHHGAQRFRADSFPLAALACAVASALLVMGGTAHAQEASASPPSAPTAVSLSLPSQPLAQALGVLSRQYGTAIGGESSLLEGRTAPAVRGTVTLQQALERVLAGSGLTVVRSGASGFTVIRAAAAGTTTLAPVTVTADAEETATAHMPGYIARRNTTGSKTDTPIIETPQSISVVTADFIEATGATRLKEALAYTPGINVSPWGADSRFDWTILRGFDAQAPGYYLDGLQLRNNNGWAIWQTESYGTERVEVLRGPSSVLYGQNGPGGMINVVSKRPTEEPLHELQVQFGDNARRQIAGDFSGPLDAEGKVLYRLTGLVRDAKLPASGLPNDRTFLAPALTWKPSGDTTLTVLSHYLRVRDGSSYGSFPEVGTLLPNPNGRFSPKTYVGDPNFDRFNQDQWMLGYLLEHRLNDTFTFRQNARIGSNKVDYGQVFNQPNFVTVDPDNADSPANYRVLSRFPFASKEKSRIASIDNQLQARLHWGDWQHTLLFGLDYQRSRNDQRTSNSGTVPDIDGYLPVHEGFVTTADPWFDARTTLSQTGFYMQDQIKWGDWVATLGGRYDSARAVSYSHIDGSTTRVSDHKFTSRAGLVYLHPSGWAPYFSYSESFSPTVTIDPQTQQPLKPETGRQYEVGVRYQPAGRKDKYSAAVFDLRRQNYITYDADFVPKQTGEILVRGLELEASFEPMPRMNVTAAYTYTPKAVVTASSTASDIGKQMQAVSRNQLSVWADYRFSNGVKTGLGVRFMGSNRGYQESTKVPVPSYAVFDALVGYDFERWNLALNLRNLGNKTYVANCSSGSCYYGEPRKVLVTATYRW*