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SCNpilot_cont_300_bf_scaffold_22_curated_31

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 39009..40019

Top 3 Functional Annotations

Value Algorithm Source
anti-FecI sigma factor FecR n=1 Tax=Comamonas sp. B-9 RepID=UPI0003954D94 similarity UNIREF
DB: UNIREF100
  • Identity: 52.8
  • Coverage: 326.0
  • Bit_score: 328
  • Evalue 6.90e-87
Anti-FecI sigma factor FecR {ECO:0000313|EMBL:KGH29656.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Pseudomonas testosteroni).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.1
  • Coverage: 320.0
  • Bit_score: 303
  • Evalue 4.30e-79
FecR similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 320.0
  • Bit_score: 282
  • Evalue 1.80e-73

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Taxonomy

Comamonas testosteroni → Comamonas → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1011
ATGGCCTCCCGCACCGCCCCCCTGCTCAGAGACGAAGAACGCCGCGCGCCGCGCGCGCTGGTGGAACACGCGCTGACGCTCATCGGCCGCATCCACCGCGGCAGCCCCGAAGCCGCGCACGCCGCCGAGGCCGAACTGAGCCGCTGGCGCGCGCTATCCCCCGGCAACGCCGAAGCCACGGCCACCGCGCAGCGCATCTGGAACGCGGCAGACGCAGGCGCCCTGCGCGACCAGCTGCCGCTGCCGCCCTCCGCCGCGCAGGAACGCCAGTCGCGCCGCCGCGTCGTCGGCATGCTGGGCGTGGCCGGTTTTGCCGCGCTGGCCGGTGCGGGCGGGCGCTGGTACTGGCAACGCCCGGTCTACGAGGCCGCGCCGCAGACCGGCCAGGCGCAACTGCTGTCGCATGCGCTGCCCGACGGCAGCATGCTCGACCTCGCGGCCAACACAGCGCTGCAAGTCGTGCTCTACCGCGACCGGCGCACCGTGCGCCTGGTTCGCGGCGAGGCGCGCTTCGCCGTGGCACACGACGCCGACCGCCCCTTCACCGTGGAGACCGACTGGGGCCGCGTGCGCGTGCTGGGCACCGTCTTCACGGTATCTGTTCGCGATGGCCGCATGCGGCTGACCGTGGCCGAAGGCCGGGTGGCGGTGTGGGCCCACGGCCAGGCCGACGCGCCGCCCTCCACCATCCTGCAGGCGGGCGAAGCCATCGAGGCCGACGCGAACGGCCTGGGCCCGCGCAGCAGCGTCGACATCGGCGAGGTGGCCGACTGGAAACAGGGCTGGCTGGTGTTCCGCAACACACGGCTGCCCGAGGCCGTCGCACGCTGGAACGACTACCTGCGCCAGCCTCTTCGGCTGGCGGACGACGACGCGCTGCGCGAGATGCGCGTCACGGGCACTTACCAGTTGCGCGATCCGCAGGCGTTTCTGAGCGGGCTGGGCGTGATGCTGCCGGTGCGCACGGCGCGCGCGGCCGACGGCGCGACGGAGATCGCACGCCGGCCTTGA
PROTEIN sequence
Length: 337
MASRTAPLLRDEERRAPRALVEHALTLIGRIHRGSPEAAHAAEAELSRWRALSPGNAEATATAQRIWNAADAGALRDQLPLPPSAAQERQSRRRVVGMLGVAGFAALAGAGGRWYWQRPVYEAAPQTGQAQLLSHALPDGSMLDLAANTALQVVLYRDRRTVRLVRGEARFAVAHDADRPFTVETDWGRVRVLGTVFTVSVRDGRMRLTVAEGRVAVWAHGQADAPPSTILQAGEAIEADANGLGPRSSVDIGEVADWKQGWLVFRNTRLPEAVARWNDYLRQPLRLADDDALREMRVTGTYQLRDPQAFLSGLGVMLPVRTARAADGATEIARRP*