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SCNpilot_cont_300_bf_scaffold_22_curated_46

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 55025..55876

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI0003713AA6 similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 283.0
  • Bit_score: 509
  • Evalue 1.80e-141
ABC transporter permease {ECO:0000313|EMBL:KGD92418.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.6
  • Coverage: 279.0
  • Bit_score: 419
  • Evalue 3.50e-114
binding-protein-dependent transport systems inner membrane component; K02054 putative spermidine/putrescine transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 66.9
  • Coverage: 275.0
  • Bit_score: 368
  • Evalue 2.70e-99

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 852
ATGAACCCGCGCAAGCTCACGGGCGCGCTGCTGGCGTCGCCGCTGCTGCTGCTCCTGCTGCTGGCCTTCGTCGCGCCGGTGCTGCTGATGGTGCCGCTGAGCCTGCATCCCTACGAGCCCGGCACCGGCATCTCCGCCGGCTGGACGCTCGCCAACTACACCAGCATCGTCACCGACGAGTACTACCGCGAAGTGGTGGTGCGCACGCTGGTGCTGGGCTTCGGCGTCACCGCCATCTGCCTGCTGCTGGGCTACCCGCTGGCCTACTACATCGCCAACGCGGGGCCCAGGATGCGCCTGGCGCTCACCATGCTGGTCATCTTCCCGATGCTGCTGAACCTGGTGGTGCGCTCCTTCGGCTGGATCGCGCTGCTCGCCAACCGGGGCCTGGTGAACAACCTGCTGATCGACATCGGCCTGATCGAGCGGCCGATCAAGATGATGTTCAACCTGTTCGGCCTGCTGGTGGGCATGTCGCACATCTTCCTGCCGTTCATGGTGCTGATGCTCGTGCCGGCCATCCAGGCGATCTCGAAGGACGTGCAGGCCGCCGCGTACACGCTGGCCGCGAGCCGGCTGCGGGTGTTCTGGTCGATCACGCTGCCCATGAGCGCGCCGGGCATCCTGTCGGGCTCGATCCTCGTCTTCGTGCTGACCATCAGCGCGCTGGTCACGCCGCGCATGCTGGGCGGCCCCACCTACAAGGTGATGGCCACGCTGATCTACGACGACTTCCTGCAGACGCTCGACTGGCCCGCCGGCGCGGCCATGTCGTTCGCGCTCACCGCGCTCACGCTGGCGGTCATCGGCCTGTCGAGCCGCGTGCTCAAGCGCTGGGGAGGCAACGCATGA
PROTEIN sequence
Length: 284
MNPRKLTGALLASPLLLLLLLAFVAPVLLMVPLSLHPYEPGTGISAGWTLANYTSIVTDEYYREVVVRTLVLGFGVTAICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALLANRGLVNNLLIDIGLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAAYTLAASRLRVFWSITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDFLQTLDWPAGAAMSFALTALTLAVIGLSSRVLKRWGGNA*