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SCNpilot_cont_300_bf_scaffold_22_curated_47

Organism: scnpilot_dereplicated_Variovorax_1

near complete RP 52 / 55 MC: 3 BSCG 51 / 51 ASCG 13 / 38 MC: 1
Location: 55873..56664

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter permease n=1 Tax=Variovorax paradoxus RepID=UPI00037D40D3 similarity UNIREF
DB: UNIREF100
  • Identity: 89.7
  • Coverage: 263.0
  • Bit_score: 463
  • Evalue 1.80e-127
spermidine/putrescine transport system permease protein potC-like similarity KEGG
DB: KEGG
  • Identity: 84.4
  • Coverage: 263.0
  • Bit_score: 431
  • Evalue 1.40e-118
ABC transporter permease {ECO:0000313|EMBL:KGD92419.1}; TaxID=1532557 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Achromobacter.;" source="Achromobacter sp. RTa.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.6
  • Coverage: 253.0
  • Bit_score: 394
  • Evalue 1.10e-106

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Taxonomy

Achromobacter sp. RTa → Achromobacter → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 792
ATGAACGCCGACGGAAAGAAGACGCCCGTGCTCGCGGCCACGGCCATCGCGGTGGTGGTGTTCCTGCAGATTCCGGTGCTGGTGGTGGTGCTCGCGGCATTCAGCAAGACGGCCTACCTCACCATACCGCCCAAGGGCCTGACCTTTCACTGGTTCGAGGTGGTGCTGCGCGACCCCGAGTACCTGGGCGCCGCATGGACCAGCCTGTGGCTGGCCGCCGCATCCACCGCCGCGGCGCTGGTGCTGGGCCTGATCGCGGCCTACGCCATTCACCGCCGCATGGTGCCGGGCGCCGCGGCGCTCACCTCGCTCTTCATGGCGCCGCTGATCCTGCCTTCGGTGGTGCTGGGCGTCGCGCTGCTGCAGTACTACACGATGACCGGCCTGCGCGGCAACTCGCTGGGCCTGTGGCTCGCTCACGTGGTCATCACCGTGCCCTACGTAGTGCGGGCCAGCCTGGGCAGCCTCTCGTCGGTCGACGAATCGCTGGAAGACGCGGCGCGGGTGCTCGGCGCGGACGGTTTCACCAGCTTTCGCCTCGTCACGCTGCCGCTGGTGAAGCCGGGCCTGGTGGCCGGCGGCCTCTTCGCCTTCATCACCTCGCTGGACAACGTGCCGGTGTCGGTGTTCCTTCTCTCCGCAAGCCAGACGACGCTGCCCGTGAAGATCTTCACCTCGGTCGAGCAAGGCGTGGACCCCAGCGTGGCCGCGGTCTCCACCCTGCTCATCGTGACCACCGGCATCGTGCTGCTGCTGGCGGAGCGCTGGACCGGCTTTCACAAGCACGTTTGA
PROTEIN sequence
Length: 264
MNADGKKTPVLAATAIAVVVFLQIPVLVVVLAAFSKTAYLTIPPKGLTFHWFEVVLRDPEYLGAAWTSLWLAAASTAAALVLGLIAAYAIHRRMVPGAAALTSLFMAPLILPSVVLGVALLQYYTMTGLRGNSLGLWLAHVVITVPYVVRASLGSLSSVDESLEDAARVLGADGFTSFRLVTLPLVKPGLVAGGLFAFITSLDNVPVSVFLLSASQTTLPVKIFTSVEQGVDPSVAAVSTLLIVTTGIVLLLAERWTGFHKHV*