ggKbase home page

SCNpilot_expt_1000_bf_scaffold_3482_curated_32

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(25765..25968)

Top 3 Functional Annotations

Value Algorithm Source
cold-shock protein n=1 Tax=Kaistia granuli RepID=UPI0003752EC2 similarity UNIREF
DB: UNIREF100
  • Identity: 69.2
  • Coverage: 65.0
  • Bit_score: 97
  • Evalue 5.20e-18
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) similarity KEGG
DB: KEGG
  • Identity: 67.2
  • Coverage: 67.0
  • Bit_score: 96
  • Evalue 3.60e-18
Cold-shock DNA-binding domain-containing protein {ECO:0000313|EMBL:KDM68551.1}; TaxID=1464546 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Acetobacteraceae; Acidiphilium.;" source="Acidiphilium sp. JA12-A1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.2
  • Coverage: 67.0
  • Bit_score: 96
  • Evalue 1.60e-17

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Acidiphilium sp. JA12-A1 → Acidiphilium → Rhodospirillales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 204
ATGACCATCGGAACCGTGAAGTTCTTCAACACCTCCAAGGGCTTTGGCTTTATCGCGCCGGAAGGCGGCGGCAAGGATGTGTTCGTCCATGCCACGGCTGTTGAAGCTGCCGGTATGCGCACCCTGAATGAAGGCCAGAAGGTCTCGTTCGACATCGTGCCCGACGCGCGTGGCGCGAAGGCCGCGAACCTCAAGCCGGTCTAA
PROTEIN sequence
Length: 68
MTIGTVKFFNTSKGFGFIAPEGGGKDVFVHATAVEAAGMRTLNEGQKVSFDIVPDARGAKAANLKPV*