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SCNpilot_expt_1000_bf_scaffold_3482_curated_33

Organism: scnpilot_dereplicated_Alphaproteobacteria_4

partial RP 35 / 55 BSCG 32 / 51 MC: 1 ASCG 8 / 38 MC: 1
Location: comp(26284..26733)

Top 3 Functional Annotations

Value Algorithm Source
GreA/GreB family elongation factor similarity KEGG
DB: KEGG
  • Identity: 49.4
  • Coverage: 154.0
  • Bit_score: 130
  • Evalue 3.80e-28
GreA/GreB family elongation factor n=1 Tax=Hyphomicrobium denitrificans (strain ATCC 51888 / DSM 1869 / NCIB 11706 / TK 0415) RepID=D8JZ23_HYPDA similarity UNIREF
DB: UNIREF100
  • Identity: 51.3
  • Coverage: 150.0
  • Bit_score: 130
  • Evalue 1.20e-27
GreA/GreB family elongation factor {ECO:0000313|EMBL:AGK57865.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.4
  • Coverage: 154.0
  • Bit_score: 130
  • Evalue 1.70e-27

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Taxonomy

Hyphomicrobium denitrificans → Hyphomicrobium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 450
ATGTCCAAGGCCTTTGTCTCCGAGACCGCGCCGTCCGCCGCCCCGCCCGAACGCATGGTGGAGGAGGGGGCCAATCCGGTGACGCCGGAGGGCATGGCGCAGATCGACGCCCATATCGCCCGCATCGAGACGGCGCTGCGAACCGAGGCCAATCCCCTGCTGCGCGAGACACTGGCGCGCGACCTGCGCTACTGGACCGTCCGCAAGGCCAGCGCCGAGATCGTGCCGCCCGCCGGCGATGGCGTGATCGGCTTCGGCGCCGCCGTCACCGTCCGGCGCAAGGGCCGCACCCAGACCTTCCGCATCGTGGGGGTGGATGAGGCCGACCCCGGCAAGGGTCTGATCAATTTTCGCGCGCCCCTGGCCCAGGCCGTTCTGGGCGCCCGCGCCGGTGACATTGTTGAGGCCGACGAACCGCTGGGCGAAATCGAAATCCGCGACGTCCGCTGA
PROTEIN sequence
Length: 150
MSKAFVSETAPSAAPPERMVEEGANPVTPEGMAQIDAHIARIETALRTEANPLLRETLARDLRYWTVRKASAEIVPPAGDGVIGFGAAVTVRRKGRTQTFRIVGVDEADPGKGLINFRAPLAQAVLGARAGDIVEADEPLGEIEIRDVR*