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SCNpilot_expt_1000_bf_scaffold_6924_curated

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_6924_curated_1
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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552..1739
DNA (1188bp) protein (396aa)
Pyruvate carboxylase Pyc n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CMM6_9RHIZ rbh
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
pycA; pyruvate carboxylase; K01958 pyruvate carboxylase [EC:6.4.1.1] rbh
SCNpilot_expt_1000_bf_scaffold_6924_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1867..2418
DNA (552bp) protein (184aa)
Phosphinothricin N-acetyltransferase Pat n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CWT6_9RHIZ rbh
Phosphinothricin N-acetyltransferase Pat {ECO:0000313|EMBL:EYR78441.1}; EC=2.3.1.183 {ECO:0000313|EMBL:EYR78441.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
bar; N-acetyltransferase; K03823 phosphinothricin acetyltransferase [EC:2.3.1.183]
SCNpilot_expt_1000_bf_scaffold_6924_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(2507..4012)
DNA (1506bp) protein (502aa)
Putative Zn-dependent protease {ECO:0000313|EMBL:EYR78962.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
metalloprotease n=1 Tax=Rhizobium giardinii RepID=UPI0003749294 rbh
peptidase M48, Ste24p rbh
SCNpilot_expt_1000_bf_scaffold_6924_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4227..4946)
DNA (720bp) protein (240aa)
Thiamine import ATP-binding protein ThiQ n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CSD7_9RHIZ rbh
Thiamine import ATP-binding protein ThiQ {ECO:0000256|HAMAP-Rule:MF_01723}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01723};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
thiQ; thiamine ABC transporter ATP-binding protein
SCNpilot_expt_1000_bf_scaffold_6924_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4939..5151)
DNA (213bp) protein (71aa)
Thiamine transport system permease protein ThiP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPV5_9RHIZ
Thiamine transport system permease protein ThiP {ECO:0000313|EMBL:EYR78964.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
thiP; thiamine transporter membrane protein; K02063 thiamine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_6924_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5275..5826)
DNA (552bp) protein (184aa)
Thiamine transport system permease protein ThiP n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EPV5_9RHIZ
Thiamine transport system permease protein ThiP {ECO:0000313|EMBL:EYR78964.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
thiP; thiamine transporter membrane protein; K02063 thiamine transport system permease protein
SCNpilot_expt_1000_bf_scaffold_6924_curated_7
unknown

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5928..6095
DNA (168bp) protein (56aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_6924_curated_8
unknown

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6065..6262
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying 8 items

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