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SCNpilot_expt_1000_bf_scaffold_20419_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_20419_curated_1
Starkeya novella, Starkeya, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1..1098
DNA (1098bp) protein (366aa)
FAD dependent oxidoreductase rbh
FAD dependent oxidoreductase n=1 Tax=Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 / NBRC 12443 / NCIB 9113) RepID=D7A303_STAND rbh
FAD dependent oxidoreductase {ECO:0000313|EMBL:ADH87721.1}; TaxID=639283 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Xanthobacteraceae; Starkeya.;" source="Starkeya novella (strain ATCC 8093 / DSM 506 / CCM 1077 / IAM 12100 /; NBRC 12443 / NCIB 9113).;"
SCNpilot_expt_1000_bf_scaffold_20419_curated_2
Agrobacterium sp. H13-3, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1198..1461
DNA (264bp) protein (88aa)
hypothetical protein
Uncharacterized protein n=1 Tax=Agrobacterium sp. (strain H13-3) RepID=F0L9W8_AGRSH
Uncharacterized protein {ECO:0000313|EMBL:ADY66160.1}; TaxID=861208 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium sp. (strain H13-3) (Rhizobium lupini (strain H13-3)).;"
SCNpilot_expt_1000_bf_scaffold_20419_curated_3
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1932..3092
DNA (1161bp) protein (387aa)
ABC transporter ATP-binding protein n=1 Tax=Agrobacterium sp. 10MFCol1.1 RepID=UPI00036D6305 rbh
peptide ABC transporter nucleotide binding/ATPase protein (EC:3.6.3.-) rbh
Peptide ABC transporter nucleotide binding/ATPase protein {ECO:0000313|EMBL:EHJ96194.1}; TaxID=1107544 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Agrobacterium tumefaciens complex.;" source="Agrobacterium tumefaciens 5A.;"
SCNpilot_expt_1000_bf_scaffold_20419_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(3047..4213)
DNA (1167bp) protein (389aa)
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYI1_9RHIZ rbh
sn-glycerol-3-phosphate import ATP-binding protein UgpC 2 {ECO:0000313|EMBL:EYR77853.1}; EC=3.6.3.20 {ECO:0000313|EMBL:EYR77853.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ABC transporter-like protein
SCNpilot_expt_1000_bf_scaffold_20419_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(4240..5067)
DNA (828bp) protein (276aa)
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77854.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
sugar/sn-glycerol-3-phosphate ABC transporter permease UgpE n=1 Tax=SAR324 cluster bacterium JCVI-SC AAA005 RepID=UPI00026286C6
ABC-type sugar / sn-glycerol-3-phosphate transport system permease protein ugpE
SCNpilot_expt_1000_bf_scaffold_20419_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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comp(5064..5360)
DNA (297bp) protein (99aa)
Binding-protein-dependent transporters inner membrane component n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTG8_9RHIZ
ABC-type sugar transport system permease component {ECO:0000313|EMBL:EYR77855.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family; K02025 multiple sugar transport system permease protein
Displaying 6 items

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