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SCNpilot_expt_1000_bf_scaffold_15240_curated

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
SCNpilot_expt_1000_bf_scaffold_15240_curated_1
unknown

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comp(3..188)
DNA (186bp) protein (62aa)

This feature has no annotations

SCNpilot_expt_1000_bf_scaffold_15240_curated_2
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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540..758
DNA (219bp) protein (73aa)
Pyridoxamine 5'-phosphate oxidase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CTT5_9RHIZ
Pyridoxamine 5'-phosphate oxidase {ECO:0000313|EMBL:EYR83490.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
hypothetical protein; K07226 hypothetical protein
SCNpilot_expt_1000_bf_scaffold_15240_curated_3
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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934..1272
DNA (339bp) protein (113aa)
Nodulation repressor NolR {ECO:0000313|EMBL:EYR83491.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ArsR family transcriptional regulator n=1 Tax=Rhizobium giardinii RepID=UPI00036C1FA5
nolR; nodulation protein NolR
SCNpilot_expt_1000_bf_scaffold_15240_curated_4
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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1448..2773
DNA (1326bp) protein (442aa)
Omega-amino acid--pyruvate aminotransferase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUN1_9RHIZ rbh
Omega-amino acid--pyruvate aminotransferase {ECO:0000313|EMBL:EYR83492.1}; EC=2.6.1.18 {ECO:0000313|EMBL:EYR83492.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
omega amino acid--pyruvate aminotransferase protein (EC:2.6.1.18) rbh
SCNpilot_expt_1000_bf_scaffold_15240_curated_5
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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3303..4265
DNA (963bp) protein (321aa)
Protein LacX, chromosomal n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CZ78_9RHIZ
Protein LacX, chromosomal {ECO:0000313|EMBL:EYR83496.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
Aldose 1-epimerase
SCNpilot_expt_1000_bf_scaffold_15240_curated_6
Shinella sp. DD12, Shinella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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4518..6212
DNA (1695bp) protein (565aa)
Adenine deaminase 1 n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CUM6_9RHIZ rbh
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4.2 {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;"
ade; adenine deaminase; K01486 adenine deaminase [EC:3.5.4.2] rbh
Displaying 6 items

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