ggKbase home page

SCNpilot_expt_1000_bf_scaffold_4003_curated_4

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 2776..3192

Top 3 Functional Annotations

Value Algorithm Source
Lactoylglutathione lyase-like lyase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D7N2_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 89.9
  • Coverage: 138.0
  • Bit_score: 261
  • Evalue 4.20e-67
Lactoylglutathione lyase-like lyase {ECO:0000313|EMBL:EYR83300.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.9
  • Coverage: 138.0
  • Bit_score: 261
  • Evalue 6.00e-67
bleomycin resistance protein similarity KEGG
DB: KEGG
  • Identity: 75.9
  • Coverage: 137.0
  • Bit_score: 223
  • Evalue 3.10e-56

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGACCGCCGCGATCGAAGGTATTCTCGAAACCGCGCTCTATGCGGACGACCTCGATGCGGCGGAGGCCTTCTACGGCGGCATCCTCGGCCTCGAAAAGATCACGCGGCAGGGCAACCGCCACGTCTTCTTTCGCTGCGGCCCCGGCGTTCTCCTGATCTTCAATGCGAAGGAGACCGCCGTTCCCCCGCCGCCGCAGGCCTTTCCCGTGCCGGCGCACGGGGCGAGCGGGCCGGGCCATGCCTGTTTCCGCGTGCCGGGGCCGGAGCTTGATTTCTGGGTGAAAAAGCTGGAAGAAGCCGGAATCGCCATCGAAGCGGATTTGCGCTGGCCGAACGGCGCCCGCTCCATCTATTTCCGCGACCCCGCCGGCAACAGCCTCGAATGTGCCGAGCCGGGCCTCTGGAACATCGCTTAG
PROTEIN sequence
Length: 139
MTAAIEGILETALYADDLDAAEAFYGGILGLEKITRQGNRHVFFRCGPGVLLIFNAKETAVPPPPQAFPVPAHGASGPGHACFRVPGPELDFWVKKLEEAGIAIEADLRWPNGARSIYFRDPAGNSLECAEPGLWNIA*