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SCNpilot_expt_1000_bf_scaffold_6778_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5735..6235)

Top 3 Functional Annotations

Value Algorithm Source
Phage tail tape measure protein, family {ECO:0000313|EMBL:EYR81888.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.5
  • Coverage: 123.0
  • Bit_score: 87
  • Evalue 1.80e-14
Phage tail tape measure protein, TP901 family, core region n=1 Tax=Labrenzia alexandrii DFL-11 RepID=B9QT20_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 33.8
  • Coverage: 130.0
  • Bit_score: 67
  • Evalue 1.40e-08

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 501
ATGAAATATCCTCGCACGGTTGATCCCGCGTCGGTCGAGGAAGAGCGGGAGCGGCGCAATCGAGACATAACCTTGCGGGCTTCGGGCGCTTATCCAGATCCGGCAAACGATCCGACACCGGAGGAAGATGCTTCTTTCATGCAGAGCCTGAAGCGTTTTTTCCTCGGAGCCGCGGCTGATCCGAATTTCGATCCCCGCCAGCACTTCGGCATCAAGACGAAAGCCGGGGCGGCAGATACCTCAGCGGCAGGCGGCATCGATATGACTACGACCGGTAGCGTGCAGACTGTCGCGCTGTCGGGAACGCCCACCGTCGTTACGCAGCCGTCCGGTGTTCAGCAGGTGCAGGTCATGAACAGTGCTCGCCCCAACGTCACGGTTCATATGAATGTGACTGTCAATGAGGCCAGCAACGTGGATACGATTGTGCGGCAGCTCGGCGGGCGGCTGCAAAATGCTATCGGCGAAATGCATCAAGGCGGGGGCGATCACGGCTATTGA
PROTEIN sequence
Length: 167
MKYPRTVDPASVEEERERRNRDITLRASGAYPDPANDPTPEEDASFMQSLKRFFLGAAADPNFDPRQHFGIKTKAGAADTSAAGGIDMTTTGSVQTVALSGTPTVVTQPSGVQQVQVMNSARPNVTVHMNVTVNEASNVDTIVRQLGGRLQNAIGEMHQGGGDHGY*