ggKbase home page

SCNpilot_expt_1000_bf_scaffold_6778_curated_11

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7885..8268)

Top 3 Functional Annotations

Value Algorithm Source
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 34.9
  • Coverage: 109.0
  • Bit_score: 74
  • Evalue 2.80e-11
Uncharacterized protein n=1 Tax=Agrobacterium vitis (strain S4 / ATCC BAA-846) RepID=B9JWN8_AGRVS similarity UNIREF
DB: UNIREF100
  • Identity: 34.9
  • Coverage: 109.0
  • Bit_score: 74
  • Evalue 8.90e-11
Uncharacterized protein {ECO:0000313|EMBL:ACM36666.1}; TaxID=311402 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium.;" source="Agrobacterium vitis (strain S4 / ATCC BAA-846) (Rhizobium vitis; (strain S4)).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 34.9
  • Coverage: 109.0
  • Bit_score: 74
  • Evalue 1.20e-10

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Agrobacterium vitis → Agrobacterium → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 384
ATGAACGATTTGGACTTTTCGCAGTTTGATATGCCGACTGATTCTTCAGCGGCGATGATCACAACGCGTTCCACCGTCGAGAAAGCTGAACCTGAATCAATATCCGTTGTCGGGAACACGGCTCCCGGGTCGCGACGGTATACCTTGTTGGTGCCGCTTAGGGTCGACGGAAAATGGCTGCGTCATGTCACGCTCCGGGCCGTGCAGCAGGGGGATATAGACGACTTCGGTACGGGTCGTATCGAGGGCATTCGCGCCTTCGTTTGCCGGATTGCTGATCTCGACCCCTCCGTCTTCGCCGCTATGAATTTCGTCGACAGTGCCGCAATCCACCAGATGTTCGGTGACATGGTTCCGGAATTTGTGCTGGAAGGGATGAAGTAA
PROTEIN sequence
Length: 128
MNDLDFSQFDMPTDSSAAMITTRSTVEKAEPESISVVGNTAPGSRRYTLLVPLRVDGKWLRHVTLRAVQQGDIDDFGTGRIEGIRAFVCRIADLDPSVFAAMNFVDSAAIHQMFGDMVPEFVLEGMK*