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SCNpilot_expt_1000_bf_scaffold_8148_curated_2

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 596..2023

Top 3 Functional Annotations

Value Algorithm Source
NAD-dependent malic enzyme {ECO:0000313|EMBL:EYR80071.1}; EC=1.1.1.39 {ECO:0000313|EMBL:EYR80071.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 475.0
  • Bit_score: 880
  • Evalue 1.20e-252
dme; NAD-dependent malic enzyme (EC:1.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 474.0
  • Bit_score: 827
  • Evalue 2.70e-237
  • rbh
malic enzyme n=1 Tax=Rhizobium meliloti RepID=UPI0003735CE7 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 474.0
  • Bit_score: 827
  • Evalue 5.10e-237
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1428
ATGGCGCTCGCCAACCCGAAGCCGGAGATCATGCCGGAAGAAGCGCGCGCCGCCCGGCCGGACGCCATGATCTGCACCGGCCGCTCCGACTTCCCCAACCAGGTCAATAACGTCCTCTGCTTCCCCTATATCTTCCGCGGCGCGCTCGATTGCGGCGCGCGCACGATCAACGAGGAGATGAAGATGGCGGCCGTGCGCGCCATCGCCGCGCTCGCCCGCGAGGAAGTGTCCGACGTCGCCGCCCGCGCCTATTCCGGCGATACGCCGAGCTTCGGGCCGAACTACCTGATCCCCTCGCCCTTCGACCAGCGGCTCATCCTGCGAATCGCGCCGGCCGTCGCGCGCGCCGCCGCCGAAACCGGCGTCGCCTCGCGGCCGATCACCGATTTCGACGCCTATCTCGACCAGCTCAACCGCTTCGTCTGGCGCTCGGGCTTCATCATGAAGCCGATCTTCGCCGCCGCGAAGAAGGCCGAGAAGAAGCGCGTCATTTTCGCCGAGGGCGAGGACGAGCGCGTGCTGCGCGCCGCCCAGGTGCTGCTGGAGGAGGAGACCGCCAGGCCCATCCTCATCGGCCGCCCGCAGATCATCGAGGCGCGCCTCAGGCGCTATGGCCTGCGCGTGCGCCCGCATGTCGATTTCGAGGTGGTGAACCCGGAAGACGATCCGCGCTACCGCGACTATGTCGACGACTACTTCCGCATCGTCGGCCGCCGCGGCGTGATCCCGGAGGCCGCGCGCACCATCGTGCGCACGAACCAGACGGTCATCGGCGCGCTCGCCGTCAAGCGCGGCGAGGCCGATGCGCTGATCTGCGGCGTCGAGGGCCGCTATGCCAAGCACCTGCGCGACGTCAGCCAGATCATCGGCAAGAAGGAGGGCGTGCTCGACTTCTCCGCGCTCAGCCTGCTCATCTCGCAGCGCGGCGCCACCTTCTTCACCGATACCTACGTCACGACGCAACCGACCGCCGAGGAGGTCGCGCAGATGACCATCATGGCGGCGAAGGAAATCCGCCGCTTCGGCATCACGCCGCGCGCCGCCCTCGTCTCGCACTCCAACTTCGGCTCGCGGGATTCGGACAGCAGCTTCAAGATGCGCAAGGCGATGGAAATCGTCCGCGAGATGGACCCGACGCTGGAGGCGGACGGCGAGATGCACGGCGATTCGGCGATCTCCGAAGTGCTGCGCCAGCGCGTCATGCCGGATTCGACGCTTACCGGCGAGGCCAACCTTCTGGTCTTCCCGAACCTCGATGCCGCCAACATCACGCTCGGCGTGGTGAAGACGATGACGGACAGCCTGCATGTCGGCCCGATCCTGCTCGGCGCCGCGATGCCCGCTCATATTCTGTCGCCGTCCGTCACCTCCCGCGGCGTCGTCAACATGGCCGCGCTCGCCGTGGTGGAAGCCTCCAACCCGAGCTGA
PROTEIN sequence
Length: 476
MALANPKPEIMPEEARAARPDAMICTGRSDFPNQVNNVLCFPYIFRGALDCGARTINEEMKMAAVRAIAALAREEVSDVAARAYSGDTPSFGPNYLIPSPFDQRLILRIAPAVARAAAETGVASRPITDFDAYLDQLNRFVWRSGFIMKPIFAAAKKAEKKRVIFAEGEDERVLRAAQVLLEEETARPILIGRPQIIEARLRRYGLRVRPHVDFEVVNPEDDPRYRDYVDDYFRIVGRRGVIPEAARTIVRTNQTVIGALAVKRGEADALICGVEGRYAKHLRDVSQIIGKKEGVLDFSALSLLISQRGATFFTDTYVTTQPTAEEVAQMTIMAAKEIRRFGITPRAALVSHSNFGSRDSDSSFKMRKAMEIVREMDPTLEADGEMHGDSAISEVLRQRVMPDSTLTGEANLLVFPNLDAANITLGVVKTMTDSLHVGPILLGAAMPAHILSPSVTSRGVVNMAALAVVEASNPS*