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SCNpilot_expt_1000_bf_scaffold_8148_curated_3

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(2186..3235)

Top 3 Functional Annotations

Value Algorithm Source
ATPase component of ABC transporter {ECO:0000313|EMBL:EYR80074.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.7
  • Coverage: 346.0
  • Bit_score: 576
  • Evalue 2.10e-161
ATPase component of ABC transporters with duplicated ATPase domain n=1 Tax=Rhizobium leguminosarum bv. viciae WSM1455 RepID=J0VB02_RHILV similarity UNIREF
DB: UNIREF100
  • Identity: 75.1
  • Coverage: 346.0
  • Bit_score: 512
  • Evalue 3.50e-142
  • rbh
ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 74.6
  • Coverage: 347.0
  • Bit_score: 509
  • Evalue 9.30e-142
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGCTCGCCGGCTGGCGCGCCGGTGCCGTCGTCGTCAGCCACGACCGGGAGCTCCTCGATACCATGGATGCCATCGTCGAGTTGACGAGCCTCGGCGCGACGCGCTATGGCGGCAACTGGACCGCCTATCGCGCGCGAAAGGCGCTGGAGCTCGCCGCCGCGCATCGCGACCTTGTCGACGCGGAAAAGCACGCGGCCGACGTGGCGCGCACCATGCAGGCGGTCGCCGAGCGCAAGGCGCGCAAGGACAGCGCCGGGCGCCGGAAGAAGGCGCGGGGCGATATTCCGCGCATCGTGCTGGGCGCGATGAAGGAGCGCAGCGAGCTGACGAGCGGGGCGAATGCGCGGCTTGCCGAAAGCCGGCAGGCGCAGGCGGGCGAGGCGGTGACGACGGCGCGCGAGCGCATCGAAATCCTCCAGCCGCTCACCGTCTGCGTGCCGCCGACGCATCTTCCCGCAAGCCGGACGGTGCTGCACATGGAGGGTGTGACGGCCGGCTACCTGCCGGACCGGCCGGTAATCCGCGACCTTTCCTTCGCGATGACCGGGCCGGAGCGGGTGGCGGTGACGGGACCGAACGGCTCCGGCAAGACGACGCTCCTCGCGCTCGTCACCGGCCAGCTTCAGCCTTGGGCGGGCAGCGTGCGGCTTTCCACCGATGCCGCCATGCTGGACCAGCGCGTCAGCCTGCTCGATCCGGCGCTGTCGATCCGCGACAACTTCCGGCGGATCAATCCCGAGGCGGACGAGAATGCCTGCCGGGCGGCACTGGCGCGCTTCATGTTCCGGGCGGATGCGGCCCTGCAGGTCGTCGGCAGCCTCAGCGGGGGGCAGATGCTGCGCGCCGGCCTTGCCGCCGTACTGGGCGGTCGAACGCCGCCGGCGCTCCTCATCCTCGACGAGCCGACGAACCATCTGGACATCACCTCCATCGAAGCGGTGGAGGCGGGCCTGCGGGCCTATGACGGCGCGCTCCTCGTCGTCAGCCACGACGAGCCGTTCCTGGAAGCGATCGGCATCACGCGCCGGCTTGAGCTTCCCTTGCGATGA
PROTEIN sequence
Length: 350
MLAGWRAGAVVVSHDRELLDTMDAIVELTSLGATRYGGNWTAYRARKALELAAAHRDLVDAEKHAADVARTMQAVAERKARKDSAGRRKKARGDIPRIVLGAMKERSELTSGANARLAESRQAQAGEAVTTARERIEILQPLTVCVPPTHLPASRTVLHMEGVTAGYLPDRPVIRDLSFAMTGPERVAVTGPNGSGKTTLLALVTGQLQPWAGSVRLSTDAAMLDQRVSLLDPALSIRDNFRRINPEADENACRAALARFMFRADAALQVVGSLSGGQMLRAGLAAVLGGRTPPALLILDEPTNHLDITSIEAVEAGLRAYDGALLVVSHDEPFLEAIGITRRLELPLR*