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SCNpilot_expt_1000_bf_scaffold_8148_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 7947..9788

Top 3 Functional Annotations

Value Algorithm Source
Putative cyclic beta-1,2-glucan modification protein CgmA n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D5L6_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 85.5
  • Coverage: 476.0
  • Bit_score: 823
  • Evalue 1.60e-235
  • rbh
Putative cyclic beta-1,2-glucan modification protein CgmA {ECO:0000313|EMBL:EYR80082.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.5
  • Coverage: 476.0
  • Bit_score: 823
  • Evalue 2.30e-235
putative cyclic beta-1,2-glucan modification protein similarity KEGG
DB: KEGG
  • Identity: 65.3
  • Coverage: 467.0
  • Bit_score: 633
  • Evalue 9.70e-179
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1842
TTGGCCCTGTTTACGCCTGCAGCCGTGGCGATCGAAGCCACCGAAGGATTAGCCGCCGAAGCGGGCTTCCTCGCACGCCATGCCAAGGCGCTCGCCGTTCTGCGCTCGCTTGCCGTCTCCGCCCTTCTCGCGCTTGCGACCGTCGCCGTCATCGAGCTCGTCACCCGCGGCTCGCTCCAGCAGACCTATGCCTACCTGACCAATCTCCAGCAGCCCGGCTGGACCACGACGGGCATCTTCTTCCTGCTGTACCTTGCCATCGACGCGTTGATCGGCCGGCAGCACAAGGCCGTGCTCCTCGTCTCGCCGCTCGTCGTGCTGATGGGCGTCATCTCGCAGCAGAAGCAGGTCTTCCTCACCGACCCGCTCTATCCGACGGACCTGCTCTTTGGCCGCCAGATCCTCGAACTGCTGCCGGTGCTGGTGCAGGATCGCCCGTGGACCGCCGCCGCCCTTGCGCTTGCCGTTGCCGCCGGCCTCGTCGGCCTCGTCGGCCTCTGGGTCTTCGCCTGGCGCCGCTTCCGGCCGCTGACGCGCAGGGAGCGCCTGACGCGGCTTGCCATCGCGCTGCCGCTGCTCGCCGGCTTCGTCTCCATCATGGACTACAACGAGTTCTCCTGGATGCGCGACCGGCTGAAGGTCTTCCCGATCATGTGGGACCAGGCCGAGAACTATCGCCATAACGGCTTCGTCATGGCCTTCACCATCAACCTGCCGATGGCCAATGTGAAGGCGCCGGCCGGCTACATGATCGACGCCATCGACAAGATTCCCTCCAAGCCCCTGCCGGCCGGAACGACGCACCGCTCCAAGCCCGACGTCATCGTGGTGATGAGCGAATCCCTGTGGGATCCGACGCGCCTTGGGACCGTGAAGCTGTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCGGCAACGTCTTCTCGCCGGAATTCGGCGGCCTCACCGCCAATGTCGAGTTCGAGGCGCTGACGGGCTTCTCCAACGCCTTCCTGCCGACGGGCAGCATCCCCTACCAGCAATATGTGCGCAAGCCGATCCCCTCGCTTGCCACCTTCTTCCGCGCGGAAGGCTATACGGCGCGCGCCATCCATCCGTTCTCCGGCTGGTTCTGGAACCGCACGAGCGTCTACAAGGCCTTCGGCTTCGAGACCTTCAAGGACGTCGACAGGATGCCGCCGCTCGCAAAACGCGGCAACTTCACCTCGGACGAGGCGCTGACGAAGGAAATCATCCGCCAGGCGGATGCGCAGGAAAACCCGTTCTTCTTCTTCGCCGTCACCCTGCAGGGCCACGGCCCCTATGACGACGGCCGCTACAAGAAGCCCGACGTCGCAATCGACGGCACGCTCGACGCCCGCGAGAACCGCATGCTCGCAAGCTACGCGCAGGGCGTGAAGGAAGCCGACCAAAGCCTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCGGCGACCACCTGCCGCCGCTCAACACGGTCTACAAGAATTCCGGCTACATGCCCGGCGTCACCGCCTCGCGCAAGGGCACGGCGGAACAGATGAAGAAGGAACACGAAACCCCGCTCGTCATCTGGTCGAACAAGACCGGCGTCGAAAAGGAGATCGGCACGATCAGCCCGGCATTCCTGTCCTATTACATCCTCAAGGAGGCCGGTTACGAGCACCCCTACTACACCGGCTTCCTCGGTGCGGTGCACGACAAGCTGCGCGTGATCGACCGATACATGCTGATCGACGCCAAGGGCAATGCGACGGCCGACTGGGCACGCAGGAAGACGGTCGACCCGCTGGTGCGCGACTTCCGCTTCCTCCAGCATGA
PROTEIN sequence
Length: 614
LALFTPAAVAIEATEGLAAEAGFLARHAKALAVLRSLAVSALLALATVAVIELVTRGSLQQTYAYLTNLQQPGWTTTGIFFLLYLAIDALIGRQHKAVLLVSPLVVLMGVISQQKQVFLTDPLYPTDLLFGRQILELLPVLVQDRPWTAAALALAVAAGLVGLVGLWVFAWRRFRPLTRRERLTRLAIALPLLAGFVSIMDYNEFSWMRDRLKVFPIMWDQAENYRHNGFVMAFTINLPMANVKAPAGYMIDAIDKIPSKPLPAGTTHRSKPDVIVVMSESLWDPTRLGTVKLSXXXXXXXXXXXXXSGNVFSPEFGGLTANVEFEALTGFSNAFLPTGSIPYQQYVRKPIPSLATFFRAEGYTARAIHPFSGWFWNRTSVYKAFGFETFKDVDRMPPLAKRGNFTSDEALTKEIIRQADAQENPFFFFAVTLQGHGPYDDGRYKKPDVAIDGTLDARENRMLASYAQGVKEADQSXXXXXXXXXXXXXXRRPPAAAQHGLQEFRLHARRHRLAQGHGGTDEEGTRNPARHLVEQDRRRKGDRHDQPGIPVLLHPQGGRLRAPLLHRLPRCGARQAARDRPIHADRRQGQCDGRLGTQEDGRPAGARLPLPPA*