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SCNpilot_expt_1000_bf_scaffold_8148_curated_9

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: 9921..10463

Top 3 Functional Annotations

Value Algorithm Source
Putative membrane protein n=1 Tax=Shinella zoogloeoides DD12 RepID=V5D106_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 294
  • Evalue 7.70e-77
Putative membrane protein {ECO:0000313|EMBL:EYR80083.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 82.2
  • Coverage: 180.0
  • Bit_score: 294
  • Evalue 1.10e-76
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 56.4
  • Coverage: 179.0
  • Bit_score: 200
  • Evalue 6.20e-49

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 543
ATGAAACCCTTCGACGACGCCGCCCAGATCCTGTTCGGCAAGTCCCCCGACCAGCTCGACGAAACCNNNNNNNNNNNNNNNNNNNNNNNNCTGCTTCATTCGCGCGAGGGCCGCATCCTCTCGCAGGACAGGAACGTCGCCTACGAGGCCAGGCAATCGCTCGGCGAGCGCATCGCCGATGCCATCGCCCGGGTCGGCGGCTCCTGGGCCTTCATCATCGCCTTCCTCGGCTTCCTGCTCGTCTGGACGATCGTCAACACGCTGGTGCTGACCCGCGACGCCTTCGACCCCTACCCCTTCATTTTCCTCAACCTCGTGCTTTCCATGCTGGCGGCGCTCCAGGCGCCGATCATCATGATGTCGCAGAACCGGCAGGCGGCGCGCAACCGCTTCGAGGCCTCCAAGGACTACGAGGTGAACCTGAAGGCGGAGATCGAACTGATGGCGCTGCATCACAAGGTCGATACGCAGTTCCTCGGCGAGATCGCCGCCCTCAAGCTGGAAGTTCTGCGCCTGCAAGACGTGTTGCGCGAAAGGGAGTGA
PROTEIN sequence
Length: 181
MKPFDDAAQILFGKSPDQLDETXXXXXXXXLLHSREGRILSQDRNVAYEARQSLGERIADAIARVGGSWAFIIAFLGFLLVWTIVNTLVLTRDAFDPYPFIFLNLVLSMLAALQAPIIMMSQNRQAARNRFEASKDYEVNLKAEIELMALHHKVDTQFLGEIAALKLEVLRLQDVLRERE*