ggKbase home page

SCNpilot_expt_1000_bf_scaffold_2438_curated_6

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(5824..6825)

Top 3 Functional Annotations

Value Algorithm Source
ATP-binding transport protein SmoK {ECO:0000313|EMBL:EYR77787.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 90.7
  • Coverage: 333.0
  • Bit_score: 597
  • Evalue 1.10e-167
ATP-binding transport protein SmoK n=1 Tax=Shinella zoogloeoides DD12 RepID=V5C846_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 90.4
  • Coverage: 333.0
  • Bit_score: 595
  • Evalue 3.90e-167
  • rbh
Glycerol-3-phosphate-transporting ATPase (EC:3.6.3.20) similarity KEGG
DB: KEGG
  • Identity: 82.6
  • Coverage: 333.0
  • Bit_score: 549
  • Evalue 5.90e-154
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1002
GTGGGCTCTCTTCAACTCAAATCGGTACGCAAGTCCTTCGGCAACGTCGATGTGATCAAGGGCATCGACCTCGACGTGAAGGATGGCGAGTTCGTCATCTTCGTCGGGCCCTCCGGCTGCGGCAAGTCCACGCTGCTGCGCATCATCGCCGGCCTGGAGGACGCGACGTCGGGCTCGATCTCGATCGACGGGGCGGAGGTGGCGACGGTGCCGCCGGCAAAGCGCGGCATCGCCATGGTGTTCCAGTCCTACGCGCTTTATCCGCACCTTTCGGTCAAGGACAATATGGGCCTCGGCCTCAAGCAGGCGGGCACGCCGAAGGCGGAGATCGACAGGCGTGTCGACAAGGCCTCGGCCATGCTCTCGCTGGAGAAGTATCTCGCCCGGCGTCCCGCGGAGCTTTCCGGCGGGCAGCGCCAGCGCGTCGCCATCGGCCGCGCCATCGTGCGCGAGCCGAAGCTCTTCCTGTTCGACGAGCCGCTGTCCAACCTCGACGCGGCGCTGCGCGTCAACACGCGGCTGGAGATCGCAAGGCTGCACCGCGAGCTGAAGGCCACCATGATCTACGTCACGCACGACCAGGTCGAGGCGATGACGCTGGCGGACAAGATCGTGGTGCTGGACGCGGGCGTCATCCAGCAGGTCGGCTCGCCGATGGAGCTCTACAACCGCCCGGCCAACCTGTTCGTCGCCGGCTTCATCGGCTCGCCGAGCATGAACTTCATCGAGGCGGGTCGCCTCGGCGTCACCGATGCCACGACGATCGGCGTGCGGCCGGAGCATGTCTCGCTGTCGCGCGAGGGCGGCGAATGGCAGGGCAAGGTGGTACATGTCGAGCATCTCGGCGCCGATACCATCGTCTATCTCGAATCGGAAAAGGTGGGACTGCTCACGGTGCGCCTGTTCGGCGAGCACCACCATGCCGTGGGCGACATCGTCTTCGCGACGCCGGCGGCGGACCAGACGCATCGTTTCGATGAAAACGGACGAGCGATACGTTGA
PROTEIN sequence
Length: 334
VGSLQLKSVRKSFGNVDVIKGIDLDVKDGEFVIFVGPSGCGKSTLLRIIAGLEDATSGSISIDGAEVATVPPAKRGIAMVFQSYALYPHLSVKDNMGLGLKQAGTPKAEIDRRVDKASAMLSLEKYLARRPAELSGGQRQRVAIGRAIVREPKLFLFDEPLSNLDAALRVNTRLEIARLHRELKATMIYVTHDQVEAMTLADKIVVLDAGVIQQVGSPMELYNRPANLFVAGFIGSPSMNFIEAGRLGVTDATTIGVRPEHVSLSREGGEWQGKVVHVEHLGADTIVYLESEKVGLLTVRLFGEHHHAVGDIVFATPAADQTHRFDENGRAIR*