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SCNpilot_expt_1000_bf_scaffold_2438_curated_7

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(6837..7901)

Top 3 Functional Annotations

Value Algorithm Source
Putative oxidoreductase n=1 Tax=Shinella zoogloeoides DD12 RepID=V5EQZ0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 93.8
  • Coverage: 354.0
  • Bit_score: 686
  • Evalue 1.80e-194
  • rbh
Putative oxidoreductase {ECO:0000313|EMBL:EYR77786.1}; EC=1.1.1.- {ECO:0000313|EMBL:EYR77786.1};; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 354.0
  • Bit_score: 686
  • Evalue 2.50e-194
putative dehydrogenase-related protein similarity KEGG
DB: KEGG
  • Identity: 88.4
  • Coverage: 354.0
  • Bit_score: 651
  • Evalue 2.00e-184
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1065
GTGAACTCTGCCACGACCCCCATCCGTGTCCTGTCCGCCGGTCTCGGCAACATGGGCAGGAGCCATGCGCTCGCCTATCACGAGAATCCGGGCTTTGAGATCGTCGGCCTCGTCAACCGCTCGAAGGTCGCCGTTCCTGATGGCCTCGAAGGCTACGAGATCCTGCCGTCCTTCCCGGAGGCGCTGAAAGCGTTGAAGCCGGAGCTCTGCTCGATCAACACCTATTCGGACAGCCATGCCGAATTCGCCATCGCGGCGATGGAAGCGGGCGCCCATGTCTTCGTGGAAAAGCCGCTGGCGACAACGGTCGCCGATGCCGAGCGCGTCGTCGCCTGCGCGCGGGCCAACGGCCGCAAGCTGATCGTCGGCTATATCCTGCGCCACCATCCCTCGTGGATGCGACTCATCGACGAGGCGCGCAAGCTCGGCGGTCCCTATGTCTTCCGCATGAACCTGAACCAGCAGTCGAGCGGGCCGACCTGGGCGACCCACAAGGCGCTGCTGCAGACCACGCCGCCCATCGTCGATTGCGGCGTGCACTATGTCGACGTGATGTGCCAGATCACCGACGCAAAGCCCGTCGAGGTGCGCGGCATGGGCCTGCGCCTCTCCGACGAGATCGCGCCCGACATGTACAATTACGGCCATCTCCAGGTGCTGTTCGACGACGGTTCGCTCGGCTGGTACGAGGCGGCTTGGGGCCCGATGATCTCGGAAACGGCCTTCTTCGTGAAGGACGTCATGTCGCCGAACGGCTCGGTCTCCATCGTCATGGACCCGAACGCCAAGTCCGACGACATCGACACGCATACCAAGACGGCGGTCATCCGCCTTCACAACGCGGCGACCGGGCCGGACGGCAGGTTCCTGTCGCCGGACGAGGACCTGAAGATGGCCGGCGAGCCCGGCCACCAGGAACTGTGCGACCGCGAGCAGGCCTTCGTTCTGAAGGCGATCCGTGAGGACATCGATCTTTCACGGCACATGGACGATGCGGTGCAGTCGCTCAGGATCTGCCTGGCGGCCGACGAAAGTGTCAGGACCGGCCAGCCGGTCAAGCTTTAA
PROTEIN sequence
Length: 355
VNSATTPIRVLSAGLGNMGRSHALAYHENPGFEIVGLVNRSKVAVPDGLEGYEILPSFPEALKALKPELCSINTYSDSHAEFAIAAMEAGAHVFVEKPLATTVADAERVVACARANGRKLIVGYILRHHPSWMRLIDEARKLGGPYVFRMNLNQQSSGPTWATHKALLQTTPPIVDCGVHYVDVMCQITDAKPVEVRGMGLRLSDEIAPDMYNYGHLQVLFDDGSLGWYEAAWGPMISETAFFVKDVMSPNGSVSIVMDPNAKSDDIDTHTKTAVIRLHNAATGPDGRFLSPDEDLKMAGEPGHQELCDREQAFVLKAIREDIDLSRHMDDAVQSLRICLAADESVRTGQPVKL*