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SCNpilot_expt_1000_bf_scaffold_2438_curated_8

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(7898..8740)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type sugar transport system, permease component {ECO:0000313|EMBL:EYR77785.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 93.2
  • Coverage: 278.0
  • Bit_score: 505
  • Evalue 3.70e-140
sugar ABC transporter permease n=1 Tax=Rhizobium sp. 42MFCr.1 RepID=UPI000368A8E8 similarity UNIREF
DB: UNIREF100
  • Identity: 88.6
  • Coverage: 280.0
  • Bit_score: 490
  • Evalue 8.70e-136
  • rbh
binding-protein-dependent transport system inner membrane protein; K02026 multiple sugar transport system permease protein similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 278.0
  • Bit_score: 477
  • Evalue 2.40e-132
  • rbh

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 843
ATGTCCAACAAGGCACGCGCCTCGCTCACCCGCTCGTCCCTCGTTCACCTCGCGCTGATCGCCTATACGCTGGTGTCGGTCTTCCCGGTGTTCCTGACGATCATCAATTCGATGAAGGATCGCAACGCGATCTTCCGCAACCCGATGCAGCTTCCGACCGCCACGACCTTCGACCTCGTCGGCTACACCACGGTGCTGGGGCAGGGGGACTTTTCGACCTACTTCCAGAACAGCTTCATCGTCACGGTGGCCGCCATCGCGCTGGTGCTGCTGTTCGGCGCCATGGCCGCGTTCGCCCTTTCGGAATACCGCTTCCGCGGCAACACGATGATGGGCCTCTATCTTGCCATCGGTATCATGATCCCGATCCGCCTCGGCACGGTCGCGATCCTGCAGGGCATGGTGGCGACGGGCCTCGTCAACACGCTGACGGCGCTGATCCTCGTCTATACCGCGCAGGGCATCCCGCTCGCCGTCTTCATCCTGTCGGAATTCATGCGGACCGTCTCCGACGACCTCAAGAATGCCGGCCGCATCGACGGGCTTTCGGAATATGCGATCTTCTTCCGCCTCGTGCTGCCGCTGGTGCGGCCGGCCATGGCGACGGTCGCCGTCTTCACGATGATCCCGATCTGGAACGACCTGTGGTTCCCGCTGATCCTGGCGCCGAGCGAGGCGACCAAGACGGTTACGCTGGGCTCGCAGATCTTCATCGGCCAGTTCGTCACCAACTGGAACGCGGTGCTCGCGGCGCTGTCGCTGGCGATCTTCCCCGTCCTCGTCCTCTACCTCGTCTTCTCGCGGCAACTGATCCGCGGCATCACCTCGGGAGCTGTAAAGTGA
PROTEIN sequence
Length: 281
MSNKARASLTRSSLVHLALIAYTLVSVFPVFLTIINSMKDRNAIFRNPMQLPTATTFDLVGYTTVLGQGDFSTYFQNSFIVTVAAIALVLLFGAMAAFALSEYRFRGNTMMGLYLAIGIMIPIRLGTVAILQGMVATGLVNTLTALILVYTAQGIPLAVFILSEFMRTVSDDLKNAGRIDGLSEYAIFFRLVLPLVRPAMATVAVFTMIPIWNDLWFPLILAPSEATKTVTLGSQIFIGQFVTNWNAVLAALSLAIFPVLVLYLVFSRQLIRGITSGAVK*