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SCNpilot_expt_1000_bf_scaffold_5073_curated_10

Organism: scnpilot_dereplicated_Shinella_1

near complete RP 40 / 55 MC: 4 BSCG 43 / 51 MC: 6 ASCG 11 / 38 MC: 1
Location: comp(9523..10896)

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein {ECO:0000313|EMBL:AIR90656.1}; TaxID=157783 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas cremoricolorata.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.3
  • Coverage: 453.0
  • Bit_score: 587
  • Evalue 1.20e-164
D-2-hydroxyglutarate dehydrogenase n=1 Tax=gamma proteobacterium NOR5-3 RepID=B8KHU6_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 47.0
  • Coverage: 457.0
  • Bit_score: 411
  • Evalue 1.40e-111
  • rbh
FAD linked oxidase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 44.5
  • Coverage: 456.0
  • Bit_score: 393
  • Evalue 7.40e-107
  • rbh

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Taxonomy

Pseudomonas cremoricolorata → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1374
ATGGTCGATCTCGACGATGTACGGCGGATCGTGGGCGAGCGCCACGTCGTGGACGGCGCGGCGCTTTCGGGCCGGCCGCAGGATTTCTGGGTCCACACGCCGACCGCGGCGCTGGGGCTGGCAAAGCCGAAGGACGTGCAGGAGCTCTCCGCCCTGCTTGCGCTCTGCCACCAGGAAGGCCAGCCGGTCATCGTCGAGGGCGGGCGCACCAACCTCGTCGGCGCGACGCAATCGACCGGCGAGACGCTGCTCGTCTCGCTCGAGCGCCTCAACGACATTGCCGTGCCGGACCGGCAGGGGATGACCGTCGAGGTCGGCGTCGGCGCGATCATCGAGACCATCCAGCAGCGCTGCGCCACGGACGGCCTGCGCTTCGGCCTCGATTTCGGCGCGCGGGGCAGCGCCACGCTGGGCGGGGCGCTCTCTACCAATGCCGGCGGCTTCCAGGCCCTTCGCTACGGGGTCGCGCGCGACCAGGTGCTCGGCCTCGAATGCGTGCTGGCCGACGGAACGGTGCTGAGCCATCTCTCTTCGTTTGTGAAGGACAATACCGGCTACGACCTCAAGCACCTGTTCATCGGCTCGGAGGGCACGCTCGGCGTCATCACGCGGGCCGTGCTCAGGCTGCATCCCGCGCCGCAATCGGTCAACACCGCGCTGCTCGCCTTCGAGACCTTCGAGGCCGTGGCCGAGACCCTCGGCCTGATGCGCAGGGACCTCAACGGCACGCTCTCCTCCTTCGAGATCATGTGGGCCGAGTTCTTCCATTTCAACGTCGATGCGGTTTTGAACGGCCGTTCGCCCATCGAGGGCCGCTATCCGTTCTACATCCTGTGCGAATCCGAGGGTTTCGAGGCGGAAGCGGATGCGGCGCTCTTCGAGGCGGTCGTCGGCCGGGCCATCGAGGACGGGCTGGTCGCCGACGCGGTCATCGCAGCCTCCTCGCGCCAGCGGCAGGAGCTGTGGCGGATCCGCGAGGATTTCGAGGCCGAGATGCAGCTTTTCAAGACCATGATCGATTTCGACGTGTCCCTTCCGGTCGCAAGCATGGAAGCTTTCGTGAGCGAGGTGGAACGCCGCCTGAACGAGGAGGTGCCGGGCAATCTCGGCCTTCACGTTCTCGGCCATCTCGGCGACGGCAACCTGCATGTCACGACGGGCCTTGCCACGCCAGAGGGCAAGGGCGAGGTCCGCAGGCTCGTCTACGAACTGATTTCCGGCTACGGCGGGTCGATTTCCGCCGAGCACGGCATCGGCCTTGCCAAGCGTGATTATCTGCACCATTCCCGCACGGCGGCGGAGATCGCCACCATGAGGGTGCTGAAGCAGGCGCTCGACCCGAAGGGGATCCTCAATCCCGGCAAGGTCATCTGA
PROTEIN sequence
Length: 458
MVDLDDVRRIVGERHVVDGAALSGRPQDFWVHTPTAALGLAKPKDVQELSALLALCHQEGQPVIVEGGRTNLVGATQSTGETLLVSLERLNDIAVPDRQGMTVEVGVGAIIETIQQRCATDGLRFGLDFGARGSATLGGALSTNAGGFQALRYGVARDQVLGLECVLADGTVLSHLSSFVKDNTGYDLKHLFIGSEGTLGVITRAVLRLHPAPQSVNTALLAFETFEAVAETLGLMRRDLNGTLSSFEIMWAEFFHFNVDAVLNGRSPIEGRYPFYILCESEGFEAEADAALFEAVVGRAIEDGLVADAVIAASSRQRQELWRIREDFEAEMQLFKTMIDFDVSLPVASMEAFVSEVERRLNEEVPGNLGLHVLGHLGDGNLHVTTGLATPEGKGEVRRLVYELISGYGGSISAEHGIGLAKRDYLHHSRTAAEIATMRVLKQALDPKGILNPGKVI*